Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3962 82.4 7e-11 >seq3962 Length=6517 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 24055 CCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGA 24114 |||||||| | ||||| ||||| |||||||| ||||| || || ||||| ||| Sbjct 251 CCATCGAGAACGTCAAGGCTAAGATCCAGGACAAAGAGGGCATCCCCCCAGATCAGCAGC 310 Query 24115 GACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTC 24174 ||||||| | || ||||||||||||||| || | | | | | | || || ||||| | Sbjct 311 GACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCTTGTCTGACTACAACATCC 370 Query 24175 AAAAAGAATCTAC 24187 | |||||||| || Sbjct 371 AGAAAGAATCCAC 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429903182850765