Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3962 84.2 2e-11 >seq3962 Length=6517 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || || ||||| || ||| || ||||| |||||||| || | Sbjct 414 ACCACCACGCAGACGGAGAACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGA 355 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || |||| || | |||||||||||| || ||||| ||||||||||| || Sbjct 354 CAAGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGATCTGGGGG 295 Query 34020 CACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 294 GATGCCCTCTTTGTCC 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397032092102926