Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_010583.1 Length=111382 Score E Sequences producing significant alignments: (Bits) Value seq122 93.3 3e-14 >seq122 Length=4874392 Score = 93.3 bits (102), Expect = 3e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 29168 CTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGCATTAAATCG 29227 |||||| || ||||| | || || || | ||| ||||| ||||| | || || || Sbjct 1181317 CTGAGTGAAGGTACGGGTGATCACATCCTGCTGCTGTTCTTTAGTCAGCGAGTTGAAACG 1181376 Query 29228 AACAGCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATGTTTCTGTGC 29287 || |||||||| || || |||||||| ||||| || |||||||| || | || | || Sbjct 1181377 TACCGCATAGCCCGACACGCGAATGGTTAACTGCGGATATTTTTCCGGGTCTTCCATCGC 1181436 Query 29288 ATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 29341 |||| ||| ||||| | | ||| ||||| || ||||||||||| || || Sbjct 1181437 TTCCAGCAGCATTTCACGGTTCATCACGTTGACGTTGAGGTGCTGACCCCCTTC 1181490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356270403692849