Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq1959 89.7 1e-13 >seq1959 Length=43063 Score = 89.7 bits (98), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 22218 GCTGGCGAACGCGACAATTACCGATATGCAAACGCGCCAGCGTGATGTAGCAGAACTTGA 22277 |||||| || | ||||| ||||| ||||| || |||||||| ||||| || | ||| || Sbjct 9615 GCTGGCTAAGTCAACAATCACCGACATGCAGACACGCCAGCGCGATGTTGCTGCACTCGA 9674 Query 22278 CGCCAGATACACAAAGGAGCTTGCTGATGCGAAAGCTGAGAATGATGCTCTTCG 22331 ||| | |||||||||||| | |||||||| ||||| || ||| |||| || Sbjct 9675 CGCAAAGTACACAAAGGAGTTAGCTGATGCTAAAGCCAGTAACGATTCTCTCCG 9728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134079627337418