Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq109 91.5 2e-13 seq122 82.4 8e-11 >seq109 Length=705085 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 106690 CTTAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTCAAATCCAA 106749 |||||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||| | Sbjct 321751 CTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCATAGGTTCGAATCCTA 321810 Query 106750 TAGGG 106754 ||||| Sbjct 321811 TAGGG 321815 >seq122 Length=4874392 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 106690 CTTAGCTCAGTTGGATAGAGCAGCGGCCTTCTAAGCCGCGGGTCATTGGTTCAAATCCAA 106749 |||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||| Sbjct 814345 CTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCTG 814404 Query 106750 TAGGGACTGCCAA 106762 ||||| | |||| Sbjct 814405 TAGGGCGTACCAA 814417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524230956055800