Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq122 136 4e-27 >seq122 Length=4874392 Score = 136 bits (150), Expect = 4e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 62002 GTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACA 62061 || || ||||| | ||| ||||||||||||||||||| ||||| ||| ||||| || || Sbjct 3215650 GTAAAGGTACGCGTAATCACGTCACGCTGCTGTTCTGGCGTCAAAGAGTTAAAACGCACG 3215709 Query 62062 GCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 62121 |||||||| ||||| ||||| |||||||| |||||||| || || || | || || ||| Sbjct 3215710 GCATAACCGGAAACGCGAATGGTCAGCTGCGGATATTTCTCCGGGTGCTTCACCGCCTCT 3215769 Query 62122 TCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTCAAC 62174 || | ||||| |||| || || ||||||||||| || || || || || Sbjct 3215770 TCCAGCGTTTCACGGCTCAGGACGTTGACGTTCAGATGCTGACCGCCCTCCAC 3215822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529558538940000