Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq93 114 2e-20 >seq93 Length=974399 Score = 114 bits (126), Expect = 2e-20 Identities = 136/182 (75%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||| || || || | |||||| |||||| ||| || ||||| || ||||| ||||| Sbjct 914629 TCATCTCGTGAAATCAACTCATTGCTGAAGGTAAGACCTGGCATAAGCCCTCTCTTCTTA 914688 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 ||||| || |||||| ||| |||||||| |||||||| ||||||||| || || || Sbjct 914689 AGCCAGAAAATGGCAGCAAAGCTTCCAGAGAAGAAGATACCCTCCACAGCAGCAAAGGCA 914748 Query 119637 AATAGACGCTCAGCAAAAGGTCGAGACT--TG-TCGAACCACTTGAGAGCCCAGTTGGCC 119693 | || ||||||||||| | ||||| || | | |||||| | ||||| | |||| Sbjct 914749 ATTACTCGCTCAGCAAACGTGGCAGACTCATGAGCAATCCACTTCATGGCCCAATCGGCC 914808 Query 119694 TT 119695 || Sbjct 914809 TT 914810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588929890541400