Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq664 84.2 3e-11 >seq664 Length=66043 Score = 84.2 bits (92), Expect = 3e-11 Identities = 178/266 (67%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 || || || || ||| | || || || ||||| ||||| || | || | |||| | Sbjct 15657 CTCTCCTGCATCATGGTGACCTATCCCTCTACTCATGGGGTTTACGAGCAGACCATTCGT 15598 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 | | || | || || ||| | | ||||| || || || || ||||| || || | Sbjct 15597 GAAGTCTGCGAAATTGTCCATCAGCACGGTGGGCAAGTCTACCTGGATGGCGCCAACATG 15538 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 |||||||| || || | | | |||| | | |||||| ||||| | || || || Sbjct 15537 AATGCACAAGTGGGGATCACCACACCAGGCCATATTGGTGCCGATGTCTCCCACCTTAAT 15478 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 | |||||||||||||||||||| || || ||||| || || || | || || ||||| Sbjct 15477 CTGCATAAAACATTCTGTATTCCCCACGGCGGTGGTGGGCCAGGAATGGGACCGATAGGG 15418 Query 155103 GTAGCAAAACATCTCACACCATTTGT 155128 || | |||||| | || ||||| Sbjct 15417 GTTAAAGCCCATCTCGCGCCGTTTGT 15392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579167454877920