Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq122 91.5 5e-14 >seq122 Length=4874392 Score = 91.5 bits (100), Expect = 5e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 46648 CGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 46707 ||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||| ||| Sbjct 4587367 CGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTC 4587426 Query 46708 CGGGCCTGCAAATCGAAAGGAATCC 46732 || ||||| || ||| ||||| Sbjct 4587427 CGCCCCTGCCAAATAAAAACAATCC 4587451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153697368196204