Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq122 95.1 4e-15 >seq122 Length=4874392 Score = 95.1 bits (104), Expect = 4e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| ||||| |||||| || || |||||| | || | ||||||||| |||||| Sbjct 3442376 ACGGCAAGCTCTCCTGCCAACTGTATCAGCGCTCCTGCGATATCTTCCTCGGCCTGCCGT 3442317 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 |||||||||| |||||||| ||||| ||| | | || | ||| || ||| | | Sbjct 3442316 TCAATATCGCCAGCTACGCTTTGCTGGTGCATATGATGGCCCAGCAGTGCGACCTGGAAG 3442257 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999 | || || || |||||||||| ||||| ||| ||||| |||||| | |||||| Sbjct 3442256 TGGGTGATTTTGTCTGGACCGGTGGCGATACCCATCTGTACAGCAACCACCTGGAGCAGA 3442197 Query 25000 CGACCGAACAACTGTCGCGC 25019 || | || ||| ||||| Sbjct 3442196 CGCGCCTGCAGCTGACGCGC 3442177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164160589955824