Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq93 141 1e-28 >seq93 Length=974399 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 ||| | ||| || || || |||| ||||| |||||||| ||||||| |||||| || || Sbjct 914949 ATCGGCTATGTATGTGTCGATTAACAAACTGTACATTTCTGAGTGAACATTTTCCATTGC 915008 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 |||||||| ||||| || |||| ||||| | || ||||| || | | || || | Sbjct 915009 AATCTGAAAGCCATAGAAGCACCGTGCTTCTGTTACCTGAACTTCTTGACTGAATCTTTC 915068 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 ||||||||||||| || ||||||||| ||| |||||||| ||||| |||| || Sbjct 915069 CACTAAGTTTTCATTGACAATCCCATCAGAAGCAGCAAAGAAGGCAAGGACATGGGAGAT 915128 Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCCAATC 37654 ||||||| | ||||| |||| | ||| |||||| Sbjct 915129 AAAATGTTTCTCATCCTTTGTCAGCTTTGCCCAATC 915164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592270428998520