Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= NC_018269.1
Length=31766
Score E
Sequences producing significant alignments: (Bits) Value
seq154 105 1e-18
>seq154
Length=560718
Score = 105 bits (116), Expect = 1e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25059 AAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGT 25118
||| || ||||||||||| | ||| ||| || |||| |||||||||||||||| | |
Sbjct 275551 AAAGCCTTGGCGAAAGAACTGAATGTACCAGTGGTCGCCTTATCACAGCTTAACC--GCT 275494
Query 25119 CTTGAAAACAGACAG--GATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGA 25176
| | | ||| | ||||| || ||| | |||||||| ||||| ||||| || |||
Sbjct 275493 CATTGGAGCAGCGCGCAGATAAACGGCCAGTCAACTCAGATTTGCGTGAGTCAGGATCGA 275434
Query 25177 TAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGACA 25236
| || |||||||| || | ||| || || || || ||||| |||||| || |||
Sbjct 275433 TTGAGCAGGATGCCGACTTGATCATGTTTATCTATCGTGACGAGGTGTATCACGAAAACA 275374
Query 25237 GCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAAACACAGGAATGG 25285
| | |||||||| || || ||||| || || || || | |||||
Sbjct 275373 GTGATCTTAAAGGCATCGCGGAAATTATTATCGGTAAGCAGCGTAATGG 275325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 101522048926368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |