Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_018859.1 Length=77315 Score E Sequences producing significant alignments: (Bits) Value seq122 91.5 7e-14 seq109 84.2 1e-11 >seq122 Length=4874392 Score = 91.5 bits (100), Expect = 7e-14 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 67610 TGGTGCACCCTACAGGATTCGAACCTGTAACCAACGACTTAGAAGGTCGCTGCTCTATCC 67669 |||| | ||||||||||||||||||||| ||| ||| ||||||||| || |||||||||| Sbjct 814416 TGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 814357 Query 67670 -ATTGAGCTAAGGGTGCTTG 67688 | ||||||||||| || || Sbjct 814356 AACTGAGCTAAGGGCGCATG 814337 >seq109 Length=705085 Score = 84.2 bits (92), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 67609 ATGGTGCACCCTACAGGATTCGAACCTGTAACCAACGACTTAGAAGGTCGCTGCTCTATC 67668 ||||| | ||||| ||||||||||||| | ||| ||| ||||||||| || ||||||||| Sbjct 321823 ATGGTACGCCCTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGGTGCTCTATC 321764 Query 67669 C-ATTGAGCTAAGGGTGC 67685 | | ||||||||||| || Sbjct 321763 CAACTGAGCTAAGGGCGC 321746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247264324796068