Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq93 111 3e-19 >seq93 Length=974399 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| || ||||| ||||| || || || ||||| || || |||||| || || || Sbjct 914979 GTACATTTCTGAGTGAACATTTTCCATTGCAATCTGAAAGCCATAGAAGCACCGTGCTTC 915038 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||||| |||||| |||||| |||| | || |||||||| |||||||| || Sbjct 915039 TGTTACCTGAACTTCTTGACTGAATCTTTCCACTAAGTTTTCATTGACAATCCCATCAGA 915098 Query 48544 AGCAGCAAAGAAGGCAAGGACATG 48567 |||||||||||||||||||||||| Sbjct 915099 AGCAGCAAAGAAGGCAAGGACATG 915122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931459872625920