Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq122 107 2e-18 >seq122 Length=4874392 Score = 107 bits (118), Expect = 2e-18 Identities = 292/447 (65%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 94816 CGTTTTTATGATGCTGTAAGTACCCGTCAGGTTTCATTACCAACTCCTATTATGGCTGGA 94875 ||||| || ||||| | ||| | || |||| | || || || |||||| | || Sbjct 2805841 CGTTTCTACGATGCGATCTCCACCTTTAAGATTTCGCTGCCGACGCCAATTATGTCCGGC 2805900 Query 94876 GCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGGTTATTGAAGCAGGCGACTCACTG 94935 | || || || || || || || || || || || | ||||| |||||| || Sbjct 2805901 GTGCGCACCCCGACGCGCCAGTTCAGCTCCTGCGTACTGATTGAGTGCGGCGACAGCCTT 2805960 Query 94936 AAATCTATTAACAAAACTGCTAACTCAATAATTGAATACATTTCTAAACGTGCCGGTATT 94995 | || |||||| || | | | | || | | ||| ||||| | ||||||||||| Sbjct 2805961 GATTCCATTAACGCCACCTCCAGCGCGATTGTGAAGTACGTTTCTCAGCGTGCCGGTATC 2806020 Query 94996 GGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCTCGTATTGGCATGGGCGAAGTCAAG 95055 || || |||| ||| || ||||| || | || || || |||| Sbjct 2806021 GGCATTAACGCCGGTCGCATCCGTGCGCTGGGCAGCCCGATCCGCGGCGGTGAAGCATTC 2806080 Query 95056 CATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAATCATGTTCACAA 95115 || ||||| ||||| |||| || || |||||||| || || || || || || || Sbjct 2806081 CACACCGGCTGCATTCCGTTCTATAAGCACTTCCAGACCGCGGTGAAGTCCTGCTCTCAG 2806140 Query 95116 GGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAA 95175 || || | || ||||| || || || | || || || |||||| ||||||| ||| Sbjct 2806141 GGCGGCGTGCGCGGCGGTGCAGCGACCCTGTTCTACCCAATGTGGCATCTGGAAGTGGAA 2806200 Query 95176 AATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGAGAACCGTATTCGCCATATGGAC 95235 | ||||| || ||||| |||||| || || || | ||||| | || ||||||||| Sbjct 2806201 AGCCTGCTGGTGCTGAAGAACAACCGCGGCGTTGAAGGCAACCGCGTGCGTCATATGGAC 2806260 Query 95236 TACGGAATCCAGATGAACGACCTTATG 95262 ||||| | ||| ||||| | || ||| Sbjct 2806261 TACGGCGTGCAGCTGAACAAGCTGATG 2806287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537641106126480