Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= NC_019768.1
Length=41468
Score E
Sequences producing significant alignments: (Bits) Value
seq302 194 4e-45
>seq302
Length=239003
Score = 194 bits (214), Expect = 4e-45
Identities = 281/395 (71%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 26834 CTGATGTTTATGCTCGTCTGTATCTGCATCTTTCGCATCATCTATGCCGAACAAACCATT 26893
||| || | | |||| ||||| || ||||| || | ||||| || | |||| | ||||
Sbjct 149601 CTGGTGATGAAGCTCATCTGTGTCAGCATCCTTTGAGTCATCAATATCAAACAGAACATT 149660
Query 26894 GAGGCAATACTTGCGTGCATAAGAGCTTGTAGCTCCAGTAACTTGTGCAGAATCCATTCC 26953
|| |||||||| | |||||| || || || || |||||||| || || || ||||||||
Sbjct 149661 AAGACAATACTTCCTTGCATACGAACTAGTTGCCCCAGTAACCTGAGCCGAGTCCATTCC 149720
Query 26954 TTTCTTGCTTTCTTCCTCTCGTGCAAGAGCGGTTGCCGTATGACTGTT--TTCGCCATCG 27011
|||||||| || || || | ||| | || | |||||||| |||| ||| || ||
Sbjct 149721 CTTCTTGCTCTCCTCTTCCCTTGCCAAGGCACTCGCCGTATG--TGTTGATTCACCGTCT 149778
Query 27012 GTAATAGTTGCCGTGGCTTTCACGTAATACCGATCACCAATCAACACAACTTCATCGCTG 27071
||||| ||||| || | || || || ||| || |||| |||||||| ||
Sbjct 149779 GTAATCGTTGCTACAGCCCTGACATAGTAACGACTCCCTATCATTACAACTTCGTCAGAT 149838
Query 27072 ATTGATAAAAACAGGCCATTCAGTAACGGCTTAACGCCTTCAAGAATGTCTTCGCAGCTT 27131
|| | || || || || || | || ||||| || || | ||| ||||| ||| |
Sbjct 149839 ATACTCAGGAAGAGACCGTTAAGAAGAGGTTTAACCCCCTCCAAAATATCTTCACAGATA 149898
Query 27132 CTGTATTTATATTTGCCGAATGAGTTGTACTGATTCTTTGGCGCGTTCAGATTCTCCTGA 27191
| |||||||| || ||||| ||||||||| |||||||| ||||| || | ||||
Sbjct 149899 CGATATTTATACTTACCGAAAATGTTGTACTGGTTCTTTGGTGCGTTAAGTGTTCGCTGA 149958
Query 27192 ATAGCTGCCAGTCTTGCGTAAAATTCTTTGCTCAT 27226
|| |||| || |||||||||||||||| |||||
Sbjct 149959 ATCTCTGCTAGCTTTGCGTAAAATTCTTTACTCAT 149993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132566139908580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |