Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq122 96.9 9e-16 >seq122 Length=4874392 Score = 96.9 bits (106), Expect = 9e-16 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25849 GCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCCAACTT 25908 |||||| || |||| || |||||||| || ||| || |||||||| || |||| ||| Sbjct 4802265 GCCTTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGCTT 4802206 Query 25909 CCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGCTTGTC 25968 ||| | | |||||| |||||||| || ||||| ||| | | || ||||||||||| Sbjct 4802205 GCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTGTC 4802146 Query 25969 TTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCGTTAGGCATATA 26028 | || ||| || | | | || || ||||| || || ||||| || Sbjct 4802145 GCGCCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGCCATTCGGCATGTA 4802086 Query 26029 CCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTT 26076 | ||||||||||||||| || | || ||||| | ||||| ||||| Sbjct 4802085 GCGAACTTCCGGGTCCTGCCCCAGATTTCCGACTAAAATTACTTTGTT 4802038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123651602959864