Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq45 109 3e-19 >seq45 Length=1811775 Score = 109 bits (120), Expect = 3e-19 Identities = 115/149 (77%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 |||||| ||||||| ||| ||| || || || |||||||| | |||||||| | |||| Sbjct 850256 CATTTTTCTCAACTCTCTTCATGAACAAGTCAGGAATCCATAAGGCATAAAAAAGGTCTC 850315 Query 25974 TCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCT 26032 | || | | || || || || ||| |||||||| || |||| ||||||||| | |||| Sbjct 850316 TTGCACGAACCTCCTCCTTGCCAGTG-TTCTTTTTCAGGTCTAGGAAATCAAACACATCT 850374 Query 26033 GAGTGCCATGGTTCTAAATAGATAGCAAA 26061 | ||||||||||| | ||||||||||| Sbjct 850375 GCATGCCATGGTTCAAGGTAGATAGCAAA 850403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253020685377725