Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq122 82.4 9e-11 >seq122 Length=4874392 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/195 (71%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 143004 CTTGAAGGCATTCGCTTCTATGTCAGTTTCGCTTGCTCTTTTGGTTTTGGGGAGCTTAAA 143063 || |||| || ||||| || ||||| ||||| |||||||| | |||| |||| || Sbjct 2808245 CTGGAAGCGATCCGCTTTTACGTCAGCTTCGCCTGCTCTTTCGCCTTTGCCGAGCGCGAA 2808304 Query 143064 CTTATGGAAGGTAGTGCAAAGAT-ATTATCCCTCATTGCGAGAGATGAATCTCAGCACCT 143122 || |||||||| | ||| || || |||| | | || || | |||||| ||| |||||| Sbjct 2808305 CTGATGGAAGGCAATGCCAAAATCATTAAGC-TGATCGCCCGCGATGAAGCTCTGCACCT 2808363 Query 143123 TGTCATCACCCAGAATATCCTTAAGAAG-TGGGCAGCAGGT--GATGATCCCGAAATGAA 143179 | ||| ||| |||| || || | || |||| || || ||||| |||||| Sbjct 2808364 GACCGGCACTCAGCATATGCTGAACCTGCTGCGCAGTGGGGAAGACGATCCGGAAATGGC 2808423 Query 143180 AGAGATTGCTAAGGA 143194 ||||||||||| || Sbjct 2808424 CGAGATTGCTAAAGA 2808438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584789414714280