Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_020879.1 Length=161978 Score E Sequences producing significant alignments: (Bits) Value seq109 82.4 8e-11 >seq109 Length=705085 Score = 82.4 bits (90), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 62234 CCCTATTGGATTCGAACCAATGACCCGCGGCTTAGAAGGCCGCCACTCTATCCGACTGAG 62293 |||||| ||||||||||| |||||| ||||||||||||||| |||||||| |||||| Sbjct 321815 CCCTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGGTGCTCTATCCAACTGAG 321756 Query 62294 CTAAG 62298 ||||| Sbjct 321755 CTAAG 321751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518161031292240