Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq83 86.0 7e-12 >seq83 Length=912621 Score = 86.0 bits (94), Expect = 7e-12 Identities = 245/377 (65%), Gaps = 0/377 (0%) Strand=Plus/Minus Query 76362 AAAGCATCATACAGACCTGGCACATCGTGAGGACTGAATAGTGAGATCTCTCCGTTACTG 76421 || ||||| || || ||||||||||| ||||||||||| ||||| || ||| | Sbjct 580263 AAGGCATCGTATAGCCCTGGCACATCCGATGGACTGAATAGCGAGATATCGCCGCCTTTT 580204 Query 76422 ATGAATCGTTCATAGAAGAGTTTACTAATTTGAATGCTATAGTCTAACTTACGAACTCGG 76481 | | |||| ||| | |||||| | ||||| | || || |||| | ||| || ||| Sbjct 580203 ACCAGACGTTGATACATGAGTTTGTTGATTTGTACGCCGTAATCTAGGTGACGGACACGG 580144 Query 76482 TTGTCCTCAGTTCCTTTATTATTTTTAAGGACTAGGATGTCTTCTATTTCTTGGTGCCAG 76541 || | ||| || |||||||| ||||||| | | ||| ||||| |||||| Sbjct 580143 TTACCTTCAACACCACGGTTATTTTTCAGGACTAATAAGCTTTCAATTTCCAAGTGCCAC 580084 Query 76542 ATAGGAAAGTGAACTGTAGCAGAACCACCTCGGATGCCGTTTTGTGTGCAGCATCGTACA 76601 ||||| | | ||| || | ||| || || | |||| ||| | ||| || || Sbjct 580083 ATAGGGTAAAACAGTGTCGCGGCACCCCCGCGTACGCCGCCTTGCGAGCAAGATTTCACG 580024 Query 76602 GTTGATTCAAACTTTTTAAGGAAGGGGACAACACCTGTGTGTTGTACCTCTCCGCCTCTG 76661 | | | || | ||| ||| |||| | ||| || || | || || || | | Sbjct 580023 GCCGTCTGGAAGTGTTTGTAGAACGGGATACAACCGGTATGGAAAGCTTCACCACCACGG 579964 Query 76662 ATTTTGCTGTTGATCCCACGGATTCTGCCAGCGTTAATGCCGATACCAGCCCTTTGTGCG 76721 ||| |||| | | |||| || | |||||| || || ||||| || || | ||||| Sbjct 579963 ATTGGGCTGCCTAGCGCACGAATACGGCCAGCATTGATACCGATCCCTGCGCGTTGTGAA 579904 Query 76722 ACATAGTGACCAATAGC 76738 || || | | | ||||| Sbjct 579903 ACGTATTTAACGATAGC 579887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572009615291160