Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq122 410 8e-110 seq83 343 1e-89 >seq122 Length=4874392 Score = 410 bits (454), Expect = 8e-110 Identities = 1075/1624 (66%), Gaps = 26/1624 (2%) Strand=Plus/Plus Query 9235 CACATTTGAAATCTCCCTCCCGACACCAATCATGTCTGGTGTTCGTACACCGACCCGCCA 9294 ||| ||| | || || || ||||| ||||| ||||| || || || || ||||| ||||| Sbjct 2805861 CACCTTTAAGATTTCGCTGCCGACGCCAATTATGTCCGGCGTGCGCACCCCGACGCGCCA 2805920 Query 9295 ATTCAGCTCATGCGTAAAAATCGAAAGCGGTGATAGCCTAAAATCAATCAATGCAACATC 9354 |||||||| |||||| || || |||| || ||||| | || || || || || || Sbjct 2805921 GTTCAGCTCCTGCGTACTGATTGAGTGCGGCGACAGCCTTGATTCCATTAACGCCACCTC 2805980 Query 9355 AGGCGCAATCGTGAGTTACGTTTCACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTAT 9414 |||| || |||| |||||||| |||||||| ||||| ||||||||||| ||||| || Sbjct 2805981 CAGCGCGATTGTGAAGTACGTTTCTCAGCGTGCCGGTATCGGCATTAACGCCGGTCGCAT 2806040 Query 9415 CCGAGCATTAGGTTCTGAGATTCGTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATT 9474 ||| || | || ||| || || |||||||| | || || || || || || || Sbjct 2806041 CCGTGCGCTGGGCAGCCCGATCCGCGGCGGTGAAGCATTCCACACCGGCTGCATTCCGTT 2806100 Query 9475 CTACAAACACTTCCAAACAGCAGTGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGC 9534 ||| || |||||||| || || ||||| | || || ||||| || || ||||| || Sbjct 2806101 CTATAAGCACTTCCAGACCGCGGTGAAGTCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGC 2806160 Query 9535 GGCAACGGTATTCTACCCAATGTGGCACCTAG-AGTACAAATCACTAATCGTACTCAAGA 9593 || || | ||||||||||||||||| || | ||| ||| | || | || || |||| Sbjct 2806161 AGCGACCCTGTTCTACCCAATGTGGCATCTGGAAGTGGAAAGC-CTGCTGGTGCTGAAGA 2806219 Query 9594 ACAACCGTGGTATCGAAGAAAACCGTGTACGTCATATGGACTACGGTGTACAAATTAATG 9653 ||||||| || | |||| ||||| || ||||||||||||||||| || || | || Sbjct 2806220 ACAACCGCGGCGTTGAAGGCAACCGCGTGCGTCATATGGACTACGGCGTGCAGCTGAACA 2806279 Query 9654 GCCTGATGTATAAGCGTCTGCTGTCTGGTCAGAACATCACTTTATTC-TCACCTCATAGT 9712 ||||||||| |||| |||||| ||| | | || ||| | ||| | | || | Sbjct 2806280 AGCTGATGTATCAGCGCCTGCTGAAGGGTGAAGAGATTACTCTGTTCAGCCCGTCCGA-C 2806338 Query 9713 GTACCGGGTCTATACGATGCATACTTCGAAGACCAAGATAAGTTCGAGCGACTGTACACC 9772 || || || | || || || | ||||| || || ||| |||| ||||| ||||||||| Sbjct 2806339 GTGCCTGGCTTGTATGACGCGTTCTTCGCCGATCAGGATGAGTTTGAGCGCCTGTACACC 2806398 Query 9773 AAA---GCGGAATCTGATCCATCAATCGAAAAAGACACAATCTCTGCTAAGGAAGCATTC 9829 ||| | | || || || || || || | | | || || ||| Sbjct 2806399 AAATACGAGAAAGACGA--CAGCATCCGCAAGCAGCGC-GTGAAGGCGGTAGATCTGTTC 2806455 Query 9830 AGCATACTAATGCAAGAGCGTGCTTCTACAGGTCGCATCTACATTCAGCACGTAGATCAC 9889 | | ||||| || || || ||||| || || |||||||||||| |||| || ||| Sbjct 2806456 TCGCTGATGATGCAGGAACGCGCCTCTACCGGCCGTATCTACATTCAGAACGTTGACCAC 2806515 Query 9890 TGTAACATTAACGGTCCTTTCGATGAGCGCGTTGCACCAGTACGCCAATCAAACCTATGT 9949 || |||| || | || || || | | || ||||| ||||| || ||||| || Sbjct 2806516 TGCAACACCCACAGCCCATTTGACCCGGCAATCGCGCCAGTGCGCCAGTCTAACCTGTGC 2806575 Query 9950 ATGGAAATCGCACTACCAACCAAACCGTTGAATAACGTCGATGATCCTGATGGTGAAGTT 10009 |||| |||||||| || ||||||||| || | || | || |||| ||| | Sbjct 2806576 CTGGAGATCGCACTGCCGACCAAACCGCTGCTGGATGTTAACGACGAAAATGGCGAAATC 2806635 Query 10010 GCGCTATGTACTCTATCTGCATTCAACTTGGGTAAGATTGAATCGGTTGGTGATTTTGAG 10069 ||||| ||||| || || || || ||| | || |||||| | | || | || Sbjct 2806636 GCGCTCTGTACGCTGTCGGCGTTTAACCTCGGCGCGATTGAGAGCCTGGACGACCTGCAG 2806695 Query 10070 CGTCTGTCTCGTATCGTTGTGCGTGCATTGGATAATCTGTTAGACTACCAAAACTACCCA 10129 ||| | | | |||||||| ||||| ||| | |||||||| |||||||| Sbjct 2806696 GAGCTGGCAACCCTGGCGGTGCGTGCGCTGGATGCCCTGCTGGACTACCAGGACTACCCA 2806755 Query 10130 TTACCTGCCGCAGAACGTTCGACAATGCGCAGACGTAGCCTTGGTGTAGGTATTATCAAT 10189 | || ||||| | ||| ||||| | | |||| || ||| | || | ||||| Sbjct 2806756 ATCCCGGCCGCGCAGCGTGGCGCAATGGGTCGCCGTACTCTGGGTATTGGCGTGATCAAC 2806815 Query 10190 TACGCCCACTGGGTGGCTAAGAATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAG 10249 ||||| ||| |||| ||||| ||| | ||| ||||| ||||| || | | Sbjct 2806816 TACGCTTACTACCTGGCGAAGAACGGCGTGCGTTACTCCGACGGCAGCGCTAATGTCCTG 2806875 Query 10250 ACGCATGAGCTGATTGAAGCTATGCAGTTCTACTTGCTACAAGCATCAATGGAACTGGCT 10309 ||||| || ||||||| || |||| || ||||| |||| || | || |||||| Sbjct 2806876 ACGCACCAGACCTTTGAAGCCATTCAGTACTGGTTGCTGAAAGCCTCTAACGATCTGGCT 2806935 Query 10310 AAAGAGAAGGGTATGTGTTCTGGATTCGAAGACACTAAGTATGCCAAAGGTGTTATGCCA 10369 | || ||||| || | | || | || || | ||||| | ||| ||||||| Sbjct 2806936 ATCGAACAGGGTGCCTGCCCGTGGTTTAACGAAACCACCTATGCGCAGGGTATTATGCCG 2806995 Query 10370 GTTGATCGTTATAAGTCTGATGTCGA---CAACACCCACACAGCAGAACTACAGATGAAT 10426 | || |||||| || | || | | | || || | || | | || | Sbjct 2806996 ATCGACACCTATAAGAAGGACCTGGATGCGATCTGTGATAC-GCCG--CTGCTGCTGGAC 2807052 Query 10427 TGGAATTGGTTGCGT-AAT--GAGATTGTCCATAATGGCCTACGTAACTCTACTCTATCT 10483 ||| | | ||||| ||| | || || | ||||| || |||||||| || ||| Sbjct 2807053 TGGGAAGCGCTGCGTGAATCGGTGAAAACCC---ACGGCCTGCGCAACTCTACGCTCTCT 2807109 Query 10484 GCATTCATGCCTTCGGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACCA 10543 || | ||||| || || || ||||| ||| | || ||||| || ||||| || |||||| Sbjct 2807110 GCCCTGATGCCGTCTGAGACCTCTTCCCAGATCTCGAACGCCACCAACGGTATTGAACCA 2807169 Query 10544 CCTCGTGGCTACATGTCAG--TTAAGCAGTCGAAGGATGGCATCTTAAAACAAATCGTAC 10601 || || || ||| |||| |||| |||||| || ||||| | || | || | Sbjct 2807170 CCGCGCGG--TCATATCAGCATTAAAGCGTCGAAAGACGGCATTCTGCGTCAGGTGGTGC 2807227 Query 10602 CGGGTTATGATAAATACAAAGACCAATACGAGTTACTATGGAATATCAAAGACAACACTG 10661 | | ||||| ||||| | ||||| | || ||| |||| | | ||| | Sbjct 2807228 CAGAGTATGAGCGCCTGAAAGATAACTACGAACTGCTGTGGGATATGCCAAATAACGACG 2807287 Query 10662 GTTACTTGGAATTGGTTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACA 10721 ||||| || | |||| | | | |||||||| ||| | || ||||| |||||| | |||| Sbjct 2807288 GTTACCTGCAGCTGGTCGGCCTGATGCAGAAATTTATCGACCAGGCCATTTCATCCAACA 2807347 Query 10722 CTAACTACGACCCAGAAAACTACCCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCAAG 10781 | ||||||||||| || | | | ||||||| || || || || | || ||| Sbjct 2807348 CCAACTACGACCCGACGCGCTTCGCCAACGGTAAGGTGCCGATGAAGCAGCTGCTGAAAG 2807407 Query 10782 ATTTGGTGACATGTTATAGACTCGGCATCAAGACACTGTACTACCACAACACACGAGATG 10841 | || |||| |||| | ||| | || || || |||||||| ||||| || || | Sbjct 2807408 ACCTGCTGACTGCCTATAAGTTTGGCGTGAAAACGCTCTACTACCAAAACACCCGTGACG 2807467 Query 10842 GTGC 10845 |||| Sbjct 2807468 GTGC 2807471 Score = 343 bits (380), Expect = 1e-89 Identities = 721/1073 (67%), Gaps = 45/1073 (4%) Strand=Plus/Plus Query 10940 AAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCCCGTTAC 10999 ||||| |||||||| || |||||||||||||| || | || ||||| | |||| | Sbjct 2807663 AAAAATAACCAACTGTTAGAACCGATGTTCTTCGGACAGCCGGTAAACGTGGCGCGTTTC 2807722 Query 11000 GACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTCTTCTGG 11059 ||||| |||||| |||| | ||||| || || | | ||||| || || ||||||||| Sbjct 2807723 GACCAGCAGAAATATGACATCTTTGAAAAGCTGATCGAAAAGCAGCTCTCTTTCTTCTGG 2807782 Query 11060 CGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGACTA-CAGTAAAATGACTGATGC 11118 || || |||||||| || || || | || || || ||||| ||| || | || Sbjct 2807783 CGCCCGGAAGAAGTGGACGTCTCGCGCGATCGTATTGACTATCAGGCGC-TGCCAGAGCA 2807841 Query 11119 GGAGAAACACATCTTCATTAGTAACCTGAAGTACCAAACATTACTCGACTCGATCCAAGG 11178 || ||||||||||| || || ||||||||||| || || | || ||||| || || || Sbjct 2807842 CGAAAAACACATCTTTATCAGCAACCTGAAGTATCAGACTCTGCTGGACTCTATTCAGGG 2807901 Query 11179 CCGTAGCCCGAATATGGCGTTCCTGCCTATTGTGTCACTACCAGAAGTCGAAACTTGGGT 11238 || |||||||| ||||||| ||||| | | || | || ||| | ||||| ||| | Sbjct 2807902 ACGCAGCCCGAACGTGGCGTTGCTGCCGCTGATCTCGATCCCGGAACTGGAAACCTGGAT 2807961 Query 11239 AGAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCATACACACACATCATTCGCAA 11298 ||||| ||| ||| ||| || |||||||| ||||| ||||| || || ||||| || Sbjct 2807962 TGAAACCTGGGCGTTCTCCGAGACTATCCACTCGCGTTCGTACACCCATATTATTCGTAA 2808021 Query 11299 TATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTTGAGAATAAGCACATCCTAGA 11358 ||| || || ||||| | || || || ||| | || || |||| ||||| Sbjct 2808022 TATCGTTAACGACCCGGCGCTGGTCTTTGACGATATCGTCACCAACGAGCAGATCCTGTC 2808081 Query 11359 GCGAGCTAAAGATATTGCTCGTTACTACGACGATCTCATC--------------TTGGCA 11404 || || |||||||| || | |||||||||||||| ||| ||||| Sbjct 2808082 ACGCGCCAAAGATATCTCTGGCTACTACGACGATCTGATCGAAATGACCAACTACTGGCA 2808141 Query 11405 T-------GCAAAG---AGCATGAGCTAAACGGCAAA---------CACACAATGCGCGA 11445 | | ||| ||| || | |||||| || |||||| Sbjct 2808142 TCTGCTGGGTGAAGGCACGCACCAGGTTGCGGGCAAAACCGTGACCGTCAGCCTGCGCGC 2808201 Query 11446 CCTAAAGAAAAAGTTGTACTTGTGCATGATGGCTGTTAATGTATTAGAAGCAGTTCGTTT 11505 || || || || | || | ||| ||||| || || | | ||||| | || || Sbjct 2808202 GCTGAAAAAGCAGCTCTATATCTGCCTGATGAGCGTCAACGCGCTGGAAGCGATCCGCTT 2808261 Query 11506 CTACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGCGAGATTATGGAAGGTAATGC 11565 ||||| || ||||| || || || || || || || ||||| | |||||||| ||||| Sbjct 2808262 TTACGTCAGCTTCGCCTGCTCTTTCGCCTTTGCCGAGCGCGAACTGATGGAAGGCAATGC 2808321 Query 11566 TAAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACACCAAAGCGGTACACAGCACAT 11625 |||||||| ||||| || || || |||||||| || |||| | ||| || ||||| || Sbjct 2808322 CAAAATCATTAAGCTGATCGCCCGCGATGAAGCTCTGCACCTGACCGGCACTCAGCATAT 2808381 Query 11626 GCTGAAGATGTGGAACAACGGCACCGATGATATGGAAATGGCTTCTATCGCACATGAGTG 11685 |||||| || | || || || ||| ||||||||| || || | ||||| Sbjct 2808382 GCTGAACCTGCTGCGCAGTGGGGAAGACGATCCGGAAATGGCCGAGATTGCTAAAGAGTG 2808441 Query 11686 TCGCGAAGAGTCAATCGAAATATTCAAGATGGCCGAAGAACAAGAGAAAGACTGGGCAAA 11745 || |||||| ||| | ||| | |||| | || || |||||||| ||||| | Sbjct 2808442 CCGTCAAGAGTGCTACGATCTGTTCGTGCTGGCTGCCGAGCAGGAGAAAGAGTGGGCGGA 2808501 Query 11746 CTATCTATTCAAAGATGGTGGTATGATCGGACTAAACAAAGATATTCTATGTGAATATGT 11805 ||||| |||| | ||| ||||| || || || ||||||||||| || | || | Sbjct 2808502 ATATCTGTTCAGCGGCGGTTCAATGATTGGCCTGAATAAAGATATTCTGTGGCAGTACAT 2808561 Query 11806 TGAGTACATCACAAGCCACCGAATGAAGTATGTCGGGCT--ACCT-CCGCT--ACACCCG 11860 |||||||||||| | | ||| ||||| ||| || || | || ||| | | ||||| Sbjct 2808562 TGAGTACATCACCAACATCCGTATGAACGCTGTTGGTCTGGATCTGCCGTTTAAAACCCG 2808621 Query 11861 GAAGCAACTAACCCAATCCCATGGATCAACAACTGGTTGGTTAGTGATAATGTTCAAGTT 11920 | ||||| ||||| ||||||||| ||| |||| ||||| || || ||| Sbjct 2808622 -----CTCGAACCCGATCCCGTGGATCAACTCGTGGCTGGTGTCCGATAACGTGCAGGTT 2808676 Query 11921 GCTCCACAGGAAGCCGAGATTAGTTCATACCTAACCGCACAAGTTGACTCGGA 11973 ||||| ||||||| || | || || ||||| || ||| | ||||| || Sbjct 2808677 GCTCCGCAGGAAGTGGAAGTCAGCTCTTACCTGGTCGGACAGATCGACTCTGA 2808729 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 6202 TCGCCGTTCTACCCGATGTTCAACTGCTGTTTGGTCGATCTTAAAGGTATGTTGGCGAAT 6261 |||||||| | ||||||||| |||||| || |||| || || ||| || || | Sbjct 3820084 TCGCCGTTTTTCCCGATGTTTAACTGCATGCTGATCGACCTGCGGGGCATGCTGACGCAC 3820143 Query 6262 GGGTTTATGATGGGTAACGCAGACATCGAAACCCCTAAGTCAATCTCAACTGCGTGTGCT 6321 || || | ||||||||||| || |||||| | |||||||| ||||| || || || Sbjct 3820144 GGCTTCAAAATGGGTAACGCCGAGATCGAACCGCCTAAGTCGATCTCCACCGCCACCGCC 3820203 Query 6322 ATCACTGCACAAATTATCGCTCAGGTTGCGTGCCACCAATACGGTGGGGTTAGCCTCAAT 6381 |||| || || || ||||| ||||| || |||| ||||| || | | | || Sbjct 3820204 GTCACCGCGCAGATCATCGCCCAGGTCGCCAGCCATATTTACGGGGGCACCACCATTAAC 3820263 Query 6382 CGTCTTGATGAGGTGTTGGCACCATACGTGGAT 6414 ||| ||||||| ||| |||| || | ||||||| Sbjct 3820264 CGTATTGATGAAGTGCTGGCGCCGTTCGTGGAT 3820296 >seq83 Length=912621 Score = 343 bits (380), Expect = 1e-89 Identities = 575/826 (70%), Gaps = 4/826 (0%) Strand=Plus/Plus Query 9218 TTCTATGATGCAGCGAGCACATTTGAAATCTCCCTCCCGACACCAATCATGTCTGGTGTT 9277 || |||||||| | | || ||| |||| ||| | || || ||||||||| |||| || Sbjct 579746 TTTTATGATGCCGTGTCGACCTTTAAAATTTCCTTACCTACGCCAATCATGGCTGGGGTA 579805 Query 9278 CGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAATCGAAAGCGGTGATAGCCTAAAA 9337 || || ||||| |||||||||||||||||||| ||||| | || |||||| || | Sbjct 579806 CGGACGCCGACTCGCCAATTCAGCTCATGCGTGCTTATCGAGTGTGGCGATAGCTTAGAC 579865 Query 9338 TCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGTTTCACAGCGTGCAGGTATTGGC 9397 || ||||| || || || | || ||||| | ||||||||||| || ||||| || || Sbjct 579866 TCTATCAACGCCACTTCTAGTGCTATCGTTAAATACGTTTCACAACGCGCAGGGATCGGT 579925 Query 9398 ATTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTCGTGGTGGTGAAGCGGTACAT 9457 || || || || ||||| || || |||| || |||||||||||||| | ||| Sbjct 579926 ATCAATGCTGGCCGTATTCGTGCGCTAGGCAGCCCAATCCGTGGTGGTGAAGCTTTCCAT 579985 Query 9458 ACTGGTTGTATCCCATTCTACAAACACTTCCAAACAGCAGTGAAATGTTGTAGCCAAGGC 9517 || ||||||||||| ||||||||||||||||| || || ||||||| ||| |||||| Sbjct 579986 ACCGGTTGTATCCCGTTCTACAAACACTTCCAGACGGCCGTGAAATCTTGCTCGCAAGGC 580045 Query 9518 GGTGTTCGTGGCGGCGCGGCAACGGTATTCTACCCAATGTGGCACCTAG-AGTACAAATC 9576 || || || || || || || || | || ||||| ||||||||| | | | | ||| | Sbjct 580046 GGCGTACGCGGGGGTGCCGCGACACTGTTTTACCCTATGTGGCACTTGGAAATTGAAAGC 580105 Query 9577 ACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAACCGTGTACGTCATATGGACTA 9636 || | || || || || ||||||||| | |||| |||||||| ||||| | || || Sbjct 580106 -TTATTAGTCCTGAAAAATAACCGTGGTGTTGAAGGTAACCGTGTCCGTCACCTAGATTA 580164 Query 9637 CGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCTGTCTGGTCAGAACATCACTTT 9696 ||| |||||||| || || |||||| | |||||| | || | ||| | | Sbjct 580165 CGGCGTACAAATCAACAAACTCATGTATCAACGTCTGGTAAAAGGCGGCGATATCTCGCT 580224 Query 9697 ATTCTCACC-TCATAGTGTACCGGGTCTATACGATGCATACTTCGAAGACCAAGATAAGT 9755 |||| || || | ||| || || ||||||||||| | ||||| ||||||| ||| Sbjct 580225 ATTCAGTCCATCGGA-TGTGCCAGGGCTATACGATGCCTTCTTCGCTGACCAAGCAGAGT 580283 Query 9756 TCGAGCGACTGTACACCAAAGCGGAATCTGATCCATCAATCGAAAAAGACACAATCTCTG 9815 | || || || ||||| | ||| | ||| || || || | | ||| | Sbjct 580284 TTGAACGTCTTTACACTCAGTACGAAGCGGATGATTCTATTCGTAAGCAAAAAATTAAAG 580343 Query 9816 CTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTGCTTCTACAGGTCGCATCTACATTC 9875 | || || | || | |||||||| |||||||| || || || || || || | Sbjct 580344 CCGTTGATCTGTTTGCCCTAATGATGCAAGAACGTGCTTCGACTGGCCGTATTTATATCC 580403 Query 9876 AGCACGTAGATCACTGTAACATTAACGGTCCTTTCGATGAGCGCGTTGCACCAGTACGCC 9935 | |||| || |||||||| | | | | || || ||| | || || || ||||||| Sbjct 580404 AAAACGTTGACCACTGTAATACTCATAGCCCGTTTGATCCGGCGGTGGCCCCTGTACGCC 580463 Query 9936 AATCAAACCTATGTATGGAAATCGCACTACCAACCAAACCGTTGAATAACGTCGATGATC 9995 | |||||||| ||| | |||||||| || || || |||||||| || | | | || Sbjct 580464 AGTCAAACCTTTGTTTAGAAATCGCGCTGCCGACTAAACCGTTAAACGATATTAACGACG 580523 Query 9996 CTGATGGTGAAGTTGCGCTATGTACTCTATCTGCATTCAACTTGGG 10041 |||||| | || || ||||| ||||| || ||||||||||| Sbjct 580524 AAAGTGGTGAGATCGCTCTCTGTACGCTATCAGCCTTCAACTTGGG 580569 Score = 199 bits (220), Expect = 3e-46 Identities = 414/618 (67%), Gaps = 35/618 (6%) Strand=Plus/Plus Query 11219 CCAGAAGTCGAAACTTGGGTAGAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCA 11278 || ||| | ||||| ||||| ||||| ||| ||| |||||| |||||||| ||||| Sbjct 581891 CCGGAACTGGAAACATGGGTTGAAACCTGGGCGTTCTCCGAAACGATCCACTCACGTTCT 581950 Query 11279 TACACACACATCATTCGCAATATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTT 11338 ||||| || || ||||| ||||| || || ||||| | | || ||||| ||| | || Sbjct 581951 TACACTCATATTATTCGTAATATCGTGAACGACCCGGCTCTAGTATTCGACGATATCGTG 582010 Query 11339 GAGAATAAGCACATCCTAGAGCGAGCTAAAGATATTGCTCGTTACTACGACGATCTCATC 11398 |||| | || ||||| || ||| |||||||| || ||||| ||||| || ||| Sbjct 582011 ACGAATGACCAGATCCTGCGCCGTGCTGAAGATATTTCTAAGTACTATGACGACCTGATC 582070 Query 11399 T--------------TGGCAT-------GCAAAG---AGCATGAGCTAAACGGCAAACAC 11434 |||||| | ||| | ||| || | || ||| | Sbjct 582071 GAAATGACCAACTACTGGCATCTTTTAGGTGAAGGTGACCATCAGGTTGCAGGAAAAACC 582130 Query 11435 ACAA---------TGCGCGACCTAAAGAAAAAGTTGTACTTGTGCATGATGGCTGTTAAT 11485 | |||||| |||||||| || | ||| | ||| ||||| || ||| Sbjct 582131 GTGACCGTTTCCCTGCGCGGATTAAAGAAACAGCTTTACCTCTGCCTGATGAGCGTCAAT 582190 Query 11486 GTATTAGAAGCAGTTCGTTTCTACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGC 11545 | | ||||| ||||||||||||| || || ||||||||||| || ||||| || || Sbjct 582191 GCCCTCGAAGCCATTCGTTTCTACGTGAGCTTTGCTTGTTCATTCGCGTTCGCCGAGCGT 582250 Query 11546 GAGATTATGGAAGGTAATGCTAAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACAC 11605 ||| | |||||||||||||| || |||||| ||||| || || || ||||| || ||| Sbjct 582251 GAGCTGATGGAAGGTAATGCCAAGATCATCCGTCTTATCGCACGGGACGAAGCCCTGCAC 582310 Query 11606 CAAAGCGGTACACAGCACATGCTGAAGATGTGGAACAACGGCACCGATGATATGGAAATG 11665 | | || |||||||| ||||| || || | | ||| |||||| ||||||| Sbjct 582311 CTGACGGGAACACAGCATATGCTAAATCTGCTGCGAAGCGGTGAAGATGATCCGGAAATG 582370 Query 11666 GCTTCTATCGCACATGAGTGTCGCG-AAGAGTCAATCGAAATATTCAAGATGGCCGAAGA 11724 || || |||||| || | |||||| | || ||||||| | ||| | || Sbjct 582371 AAAGAGATTGCTGCTGAGTG-CGAGCAAGAGTGCTTTGAGCTATTCAAAAAGGCTGCTGA 582429 Query 11725 ACAAGAGAAAGACTGGGCAAACTATCTATTCAAAGATGGTGGTATGATCGGACTAAACAA 11784 || || ||||| |||||| | || || ||| ||||| ||||||||| | || || Sbjct 582430 GCAGGAAAAAGAGTGGGCAGAATACCTGTTCCGTGATGGCTCGATGATCGGAATGAATAA 582489 Query 11785 AGATATTCTATGTGAATA 11802 ||||||||| || |||| Sbjct 582490 AGATATTCTCTGCCAATA 582507 Score = 167 bits (184), Expect = 2e-36 Identities = 274/392 (70%), Gaps = 6/392 (2%) Strand=Plus/Plus Query 10458 ATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTTCGGAAACATCTTCTCAGGTAT 10517 ||||| |||||||||| || || || ||||| ||||| || ||||| ||||| ||| | | Sbjct 580986 ATGGCTTACGTAACTCAACGCTTTCAGCATTGATGCCATCAGAAACCTCTTCGCAGATTT 581045 Query 10518 CTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACATGTCAGTT---AAGCAGTCGA 10574 |||| || |||||||| ||||| || || || ||||| ||||||| |||| |||| Sbjct 581046 CTAATGCTACAAACGGTATCGAGCCTCCACGCGGCTA--TGTCAGTATCAAAGCC-TCGA 581102 Query 10575 AGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAATACAAAGACCAATACGAGT 10634 | || || || ||| || |||| || | ||||| | |||| || || ||| Sbjct 581103 AAGACGGTATTTTACGTCAGGTCGTTCCAGAGTATGAGCGCTTACAAGATCAGTATGAGC 581162 Query 10635 TACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGGTTGCCATCATGCAGAAGT 10694 | |||||| | || ||| ||||||||| || | || | || |||||||||| Sbjct 581163 TGCTATGGGAAATGCCTTCTAACGATGGTTACTTACAACTTGTCGGGATTATGCAGAAGT 581222 Query 10695 TTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCAGAAAACTACCCAGAAAGTA 10754 |||| || || ||||| || ||||||| |||||||| || | ||| | | | | Sbjct 581223 TTGTCGACCAAGCTATCTCTTCAAACACCAACTACGATCCGACACGTTACACTGGCGGGA 581282 Query 10755 AGGTTCCAATCAAAAAGTTATTGCAAGATTTGGTGACATGTTATAGACTCGGCATCAAGA 10814 | || || || | ||||| || |||| || |||| |||| | ||||| | || | Sbjct 581283 AAGTACCGATGCAGCAGTTACTGAAAGACCTGCTGACCGCGTATAAATTCGGCGTGAAAA 581342 Query 10815 CACTGTACTACCACAACACACGAGATGGTGCT 10846 | || ||||| || ||||| || ||||||||| Sbjct 581343 CGCTTTACTATCAAAACACGCGTGATGGTGCT 581374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342946620778997