Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= NC_021190.1
Length=46150
Score E
Sequences producing significant alignments: (Bits) Value
seq122 769 0.0
seq302 351 3e-92
seq2181 150 5e-32
>seq122
Length=4874392
Score = 769 bits (852), Expect = 0.0
Identities = 1426/2083 (68%), Gaps = 32/2083 (2%)
Strand=Plus/Minus
Query 14036 TTTTACGGCAGACATACAACAGCTTGAGCCCGGCAGCGTTATTCAGCTGATTGAGATCGA 14095
|||||| | || ||||| ||||| ||||| |||||| || | ||| |||||||| ||||
Sbjct 2931094 TTTTACAG--GATATACAGCAGCTGGAGCCGGGCAGCCTTGTCCAGATGATTGAGGTCGA 2931037
Query 14096 CGGCACTGAATTCGGTATGGATCAGGTGCTGCGTTTTCATGCGCACAATATTCAGGAAGA 14155
||||| || || || |||||| | || || | || ||||| |||| || | ||
Sbjct 2931036 TGGCACAGACTTTGGCATGGATAATGTCCTCAGGTTCCATGCTTACAACATCCCTTCGGA 2930977
Query 14156 GGGGTGGGCAGCCTTCGCCGCAGAAAATCTGCCCGCCATTATCTGGCAGGGAAACCAGTA 14215
|||||| | ||||||| || || || || || |||| | |||||||| || ||||
Sbjct 2930976 CGGGTGGAAATCCTTCGCAGCGGACAACCTTCCTTCCATCGTGTGGCAGGGTAAAGAGTA 2930917
Query 14216 CGATCCCCATCCCTACGAACTTAAGGGGATGGAGTTATCGAGTACAGGTTCCCAGCCAAC 14275
|||||| ||||| || ||| | ||||||||| | ||| | || | ||||||||
Sbjct 2930916 CGATCCTCATCCTTATGAATTGTCCGGGATGGAGATGAGCAGTTCTGGCGCTCAGCCAAC 2930857
Query 14276 GCCCACGCTGTCCGTCGGGAACGTCGGAAACTATGTCACCGCGCTGTGTCTTGAATATGA 14335
|||| || || ||| | || || || || | ||| | || || || ||| | | ||
Sbjct 2930856 CCCCAAACTTTCGGTCAGTAATGTGGGGAATTTCGTCGCGGCACTCTGCCTTCAGTTCGA 2930797
Query 14336 CGATATGGTCAGGGCTAAGGTCAAAATCCATACCACGCTTTCGAAGTATCTCGATGCCGC 14395
|||| |||| | ||| || || ||||| || |||||| | | |||||||||||||| |
Sbjct 2930796 CGATCTGGTGAAGGCCAAAGTGAAAATTCACACCACGATGGCAAAGTATCTCGATGCGGA 2930737
Query 14396 CAACTGGAAAAACGGTAATCCGGGTGCCAGCCCGGCCGATGAGCGCGTACAGCTCTTTTA 14455
||||||| | || || || || | ||| || || ||||| ||||| ||
Sbjct 2930736 AAACTGGATTGAGGGCAACCCTAACGCAAACCCACAGGAGGAACGCGTCCAGCTTTTCCT 2930677
Query 14456 CGTCAATGCCAAAACCGCAGAGACGCGTGTACAGGTTGATTTCGAGCTGTGCTCTCCTTT 14515
|||||||||||||| ||||| ||||| | ||||| ||||| ||||||| || ||
Sbjct 2930676 GGTCAATGCCAAAACGGCAGAAACGCGGGCCGTTGTTGAGTTCGAATTGTGCTCACCCTT 2930617
Query 14516 CGATATTCAGAGCCTGCAGCTGCCGACACGGCAGATTACGCCTGTCTGCACCTGGTGTAT 14575
||||||||||||||||||||| || | |||||||||||||| || ||||| ||||| ||
Sbjct 2930616 CGATATTCAGAGCCTGCAGCTACCATCCCGGCAGATTACGCCCGTATGCACATGGTGCAT 2930557
Query 14576 GCGGGGCTGGTACCGAAGCGGGACTGGATGCGATTACAACGGCACGAAATACTTTACCAA 14635
|| ||||||||||| | || || || ||||| ||| ||| || || ||||||||
Sbjct 2930556 ACGCGGCTGGTACCGCACTGGAACCGGGTGCGACTACGCCGGGACCCGGTATTTTACCAA 2930497
Query 14636 AGACGGTACACCGACCGATGACCCGTCGAAAGATGTATGTGGCGGCCGCCGGCAGGATTG 14695
|||||| || | ||| ||||||||| ||||| | ||| || || |||| |||||
Sbjct 2930496 AGACGGAACGGCAACCAGTGACCCGTCAAAAGACGAATGCGGGGGGCGCCCCGCCGATTG 2930437
Query 14696 TCAGGATCGTCACGGCCCGGACGCGCCGCTGCCGTTCGGCGGTTTTCCGGCTGCAAACCT 14755
|| |||||| ||| | |||||| || ||||| || || || || ||||| |
Sbjct 2930436 CACGGCTCGTCATGGCGAAGGTCAGCCGCTACCTTTCGGGGGATTCCCAGCGGCAAATTT 2930377
Query 14756 GCAGGGGAAATA-AAATGCGTGAAAAATTGCTGGATGCTATCCGTCAGCACGTCGCTGCT 14814
||||||||||| ||||| |||||| | |||| || || ||| | ||||| || |
Sbjct 2930376 ACAGGGGAAATAGCGATGCGAGAAAAACTACTGGCCGCCATACGTAAACACGTTGCCTCG 2930317
Query 14815 GAATACCCCAAAGAAGCCTGCGGCCTGATTGTTCAGTCAGGCCAGCAACAAATCTTTATT 14874
|||||||| || || || ||||| || || | |||||||||| | || | || |||
Sbjct 2930316 GAATACCCGAAGGAGGCGTGCGGGCTAATCATACAGTCAGGCCGGACCCAGACCTATATA 2930257
Query 14875 CCCTGCCGCAACATTGCCGATAAGCCCGAGGAGACATTCACGCTCTCCCCGGAAGACCAG 14934
|| ||| | |||||||| || | ||| | || ||||| | || ||||| ||| ||
Sbjct 2930256 CCTTGCAGGAACATTGCAGACGATCCCACGCAGGACTTCACCTTGTCACCGGAGGACAAG 2930197
Query 14935 CTCGCTGCCCGCGCGCGCGGTGAGATCATCATGCTCATTCATTCCCATCCGGATGTGGTT 14994
| || || |||| || || || | ||| | |||||||| || || ||||||
Sbjct 2930196 CGAGCAGCTGAGGCGCAGGGCGATATTCTGATGGTGATTCATTCGCACCCCGATGTGCCG 2930137
Query 14995 CGGCTGGTGCCCTCGGAGCTGGACCGGATCCAGTGCGACTGGTCGGGGATTGAGTGGGGG 15054
| ||| | || | || | |||||| | |||||||| || || |||||||||||
Sbjct 2930136 CAGCTTATCCCGACAGAATTTGACCGGGTGCAGTGCGATCATTCTGGCGTTGAGTGGGGG 2930077
Query 15055 ATCATGTCCTGGCCGGACGGGGATTTTTGTACGATTTCCCCGCGTGAAGACCGGGATTAT 15114
|| ||||| ||||| ||||| ||||| || || || |||||| | || ||||||| |
Sbjct 2930076 ATTATGTCATGGCCTGACGGTGATTTCTGCACCATCAGCCCGCGCGGTGAGCGGGATTTT 2930017
Query 15115 GCCGGGCGGCAGTGGGTGCTGGGTTACGCCGACTGCTGGTCGCTTATCCGTGAATTTTAT 15174
| ||||||||||||||||||||| || || ||||||||| |||| ||| || | |||
Sbjct 2930016 GTCGGGCGGCAGTGGGTGCTGGGCTATGCGGACTGCTGGACGCTCATCATGGATTACTAT 2929957
Query 15175 CTGCGCGAATACGGCATTGTTCTCGGCAATTATTCAGTACCTTACGAATGGTGGGAGAGC 15234
| | || |||||||| || ||| | || || ||| || |||||| | |
Sbjct 2929956 CGCCAGGAGCACGGCATTACCCTGAACAACTGGTCTGTCGATTATGAGTGGTGGCATGAC 2929897
Query 15235 GGCAAAGAGCGGCTCTACGATGACAACTGGGAGCGTGAGGGGTTCGTTGAGATTGACGCC 15294
||||||||| | | |||||| |||||||||||| ||| || ||||| |||| ||| |
Sbjct 2929896 GGCAAAGAGAGCCGCTACGACGACAACTGGGAGGCTGAAGGATTCGTGCAGATAGACCCG 2929837
Query 15295 GGTGCTATGCAGCCCGGGGACATCATCATGATGAGTGTGCAGGCATCGGTGACCAATCAC 15354
| | |||| ||| || ||||| ||||||||| | |||||| | |||| |||||||||
Sbjct 2929836 GCGGAGATGCGGCCGGGCGACATGATCATGATGCGCGTGCAGTCTCCGGTAACCAATCAC 2929777
Query 15355 GCCGCTGTATATCTGGGTGATAACATCATTCTCCATCATCTTTTCGGGCACCTTTCTTCG 15414
|| || | ||| | ||||| ||| | || || ||||| | | | || || ||
Sbjct 2929776 GCAGCCATCTATGTCGGTGAAAACCTGATGCTGCATCACAACTCAGAGAGTCTGTCCACG 2929717
Query 15415 CGAACGCCTTATGGAAAATATTATCGCGACAGAACGGTCCGGGTGGTCAGGCATAAGGAC 15474
|| || ||||| | || | ||| || |||| || || || || | | | |||
Sbjct 2929716 CGCGTTCCGTATGGTGATTACTGGCGCAACCGAACCGTGCGCGTTGTGCGCCGAAGGGAG 2929657
Query 15475 AGAATGCATGGTTAAGACGCTTATTCTCGAAGGTAAAATGGCaaaaaaaTTCGGTAAACG 15534
||| ||| |||| ||| | | |||| ||||| || || ||||| |
Sbjct 2929656 CTGATGAATGCTTAAAACGATGCGATTAAAAGGCGTCATGGCTAAGAAGTTCGG---AGC 2929600
Query 15535 CGTTCA---GTTTGATGTTGCCGACCTGCGCGAGATGCTCAGGGCCATGTGTTCACAGGT 15591
| | || | | | || |||||||||||| | || | || |||||||| |||||
Sbjct 2929599 CTTACACCGCTACCACGCTGAAGACCTGCGCGAGCTTATCCGTGCGATGTGTTCTCAGGT 2929540
Query 15592 TCCCGGATTCAAAAAATATATGTCTGAAGCTCATATGAAGGGGATCCGTTTCGCCTTTTT 15651
|| ||||||||||||||| |||| | || ||| | || || | || || ||||||||
Sbjct 2929539 GCCGGGATTCAAAAAATATGTGTCCAACGCCCATCTCAACGGCGTGCGCTTTGCCTTTTT 2929480
Query 15652 TAACGGTGGCAACAATATCGGGCTGGAAGAGTTTGATATGACCCGCGGTGGAAGCGTGTA 15711
| |||| | |||||||| ||| | || || || ||| || | | | | ||
Sbjct 2929479 CAGCGGTAAAGAAAATATCGGCCTGCAGGAATTCGACATGTCCTCGGCTTCCACTGAGTT 2929420
Query 15712 CCGGATCGTGCCCGTTTATGAGGGGGCCAAAAGTTCGGGCGTCCTGCAGATAGTTGTCGG 15771
| || | ||| || ||||||| |||| | ||| | || |||||||| ||||
Sbjct 2929419 TTGCATGGAGCCGATTATTGAGGGGTCCAAGCGCGGCGGCATGCTTCAGATAGTGATCGG 2929360
Query 15772 GGCTGTTGCGCTGGTCGCTGCATTCTTTACCGCTGGTG---CGAGCATGGC----AGCCT 15824
|| || |||||||| || |||| ||||| || |||| | || || ||||
Sbjct 2929359 CGCAGTGGCGCTGGTGGCGGCATATTTTACTGCCGGTGCTTCACTCACTGCTATTGGCCT 2929300
Query 15825 GGGGCGCGGCGATGAGTGCAACAGCTATCAGCGCCACGTCAATTCTGACAGGGGTCGGAG 15884
| | | || || ||||||| | | |||| | || ||||| ||||
Sbjct 2929299 -GAGTACTTCGGTG---GCAACAGGGGTTA---CCACTGC---CCTTACAGGCCTCGGCA 2929250
Query 15885 TGTCGATGATGCTGGGGGGCGTTGTCCAGATGCTCACGCCCCAGCCATCCTTCGGCGCGG 15944
| ||| ||||| || ||| |||||||||| || || |||||| | | | |
Sbjct 2929249 TCAGCATGGCTCTGGGTGGTGTTATCCAGATGCTTACCCCGCAGCCAAATTACAACATCG 2929190
Query 15945 GTAAATCTTCCAGCACGGACAACACGCCTAACTATGCCTTCGGGGCGCCGGTCAATACCG 16004
| ||| || ||||| || |||| ||| |||||||| ||||| | || || || ||||
Sbjct 2929189 GCGCATCCTCAAGCACAGATAACAAGCCGAACTATGCATTCGGTTCACCTGTAAACACCG 2929130
Query 16005 TCGCTATGGGGCATCCTGTCCC---CCTGGCCTACGGTCTGATCGAGGCTGGGGGAGCGA 16061
| || ||||| |||| ||||| |||| || || | | || | ||| || ||||
Sbjct 2929129 TTGCGATGGGATATCCGGTCCCGGTCCTG---TATGGCCAGCGTGAAGTTGGCGGGGCGA 2929073
Query 16062 TAGTCAGCGCCGGTATGTACTCGAGCGATCAGCAATAGTGAAA 16104
| |||| || || | | | ||||| ||||| || | |||
Sbjct 2929072 TCATCAGTGCGGGCAGCTTTACCAGCGACCAGCAGTAATAAAA 2929030
Score = 385 bits (426), Expect = 1e-102
Identities = 592/838 (71%), Gaps = 10/838 (1%)
Strand=Plus/Minus
Query 16690 AATAACCCAGCTCAGGCTGGGTTTTTTAATGGGGTAAAAATGCAACTTCTCCATGGTGAA 16749
|| || ||| ||| || ||| |||||| ||||| ||| |||| |||||| | ||||||
Sbjct 2929021 AAGAAGCCACCTCCGGGTGGCTTTTTTTATGGGTGAAATATGCGACTTCTTGACGGTGAA 2928962
Query 16750 ACCATCATACAGGGTGCAAAAGGGGGCGGTGGAAGCGCGCATACTCCGGTTGAGCAACCT 16809
| || ||||| || || |||||||||| ||| ||||| || || ||
Sbjct 2928961 ATGATTTATCAGGGAAGTAAGGGAGGCGGTGGAAATCCGCGAACTCCAACCGAACAGGCT 2928902
Query 16810 GACGATCTGCTGTCGGTCGCAAAATTAAAAATGCTCATTGCCGTTTCTGAGGGAGAAATA 16869
|| || ||||| || | |||||| | || | || | ||| | || ||||| ||||||
Sbjct 2928901 GATGACCTGCTTTCCATAGCAAAACTGAAGCTACTGCTGGCCATCTCAGAGGGTGAAATA 2928842
Query 16870 CAGGGCGACCTGACCGCTCAGAATATTTTCCTCAACGATACGCCGCTGGCAAACGACAGC 16929
|||||||||||||| || ||| | |||| ||||| ||||| | ||| || ||||||
Sbjct 2928841 CAGGGCGACCTGACTGCACAGCAGATTTATCTCAATGATACCCAGCTCGCGAACGACGAT 2928782
Query 16930 GGGGAATACAACTTCAGCGGCGTGAAATGGGAGTTCCGTAAGGGCACACAGGACCAGACC 16989
|| || ||||||| ||||| ||||| | | | |||||||| |||||||||||
Sbjct 2928781 GGCACTTATAACTTCACTGGCGTTGTGTGGGATTACAGAAAGGGCACTCAGGACCAGACT 2928722
Query 16990 TATATTGCCGGGATGCCCCAGGTCGATAACGAACTGGCGGTTGGCACAACTGTCAC-CAC 17048
|||||| || |||||| |||| |||||||| ||| |||| || || || || ||
Sbjct 2928721 TATATTCAGGGCATGCCCGAGGTTGATAACGAGCTGTCGGTGGGTGTTACGGTAACGCAG 2928662
Query 17049 CACCGCGCCCTGGACACGCCAGTTTACCAATCTTTCCCTGGATGCTATCCGCATCAAGCT 17108
| ||| |||||||| ||||||| |||||| || ||||| ||||| | |||||||| ||
Sbjct 2928661 C-CCGTCCCCTGGACCCGCCAGTATACCAACCTGTCCCTTGATGCCGTGCGCATCAAACT 2928603
Query 17109 CAGCCTTCCGGTCCAGTATCTCTATAAAGATAACGGCGATATGGTGGGCACGGTCACCGA 17168
|||||| || | ||||| | || |||||||| ||||| ||||| ||||| || || |
Sbjct 2928602 CAGCCTGCCAATTCAGTACCAGTACAAAGATAATGGCGACATGGTTGGCACAGTTACGCA 2928543
Query 17169 GTATGCGATCGATTTATCAACGGACGGCGGCGCCTGGAAAACGGTTGTAAACGGCAAATT 17228
|||||| || || | || || || ||| | | ||| |||||| |||| |||
Sbjct 2928542 GTATGCTATTGACCTGTCTACTGATGGCAGTTCATGGGTGCAGGTTGTGGACGGGCGATT 2928483
Query 17229 TGACGGAAAGACCACGACGGAATATCAGCGTGACCACCGTATCGATCTGCCAAAATCCAC 17288
| |||| || |||||| | ||||| ||||||||||| || || || | || || | ||
Sbjct 2928482 TAACGGGAAAACCACGTCAGAATACCAGCGTGACCATCGAATTGACTTACCGAAGGCGAC 2928423
Query 17289 GTCCGGCTGGTCTGTCAGGGTCAGGCGTATTACGGCTGATGCCAGCGGATCAAATTCGAA 17348
| | || ||| | | |||| | |||||||| || || | | | || ||
Sbjct 2928422 GACAGGATGGGCAATTCGGGTGCGCCGTATTACTGCAGACTCAACC---TC---GTCCCG 2928369
Query 17349 ACTGGTTAACGCCTTCAAGGTGTTTTCCTATGCGGAAGTCATCGACAGCAAGCTTCGTTA 17408
||| |||| |||||||| || ||||| | || || || ||||||||||| || |||||
Sbjct 2928368 TCTGATTAATGCCTTCAAAGTTTTTTCATTCGCTGAGGTTATCGACAGCAAACTGCGTTA 2928309
Query 17409 TCCTTTAACCGCGCTCCTGTATGTCGAAGTGGACAGCAGC-CAGTTCAACGGCAGCGCGC 17467
||| || || || || |||||||||||||| ||| | || || || ||| || |
Sbjct 2928308 TCCAAATACTGCTCTACTTTATGTCGAAGTGGA-TGCATCGCAATTTAATGGCCAGGCAC 2928250
Query 17468 CGAAAGTGACCTGTAAGATAAAAGGCAAGCTGATTAAGGTTCCGGATAATTACGATCC 17525
| || | || || ||| |||||||||||| | |||||| |||||||| ||
Sbjct 2928249 CAAAGATCACATGCAAGCCGAAAGGCAAGCTGGTACGCGTTCCGACGAATTACGAACC 2928192
Score = 325 bits (360), Expect = 1e-84
Identities = 589/850 (69%), Gaps = 20/850 (2%)
Strand=Plus/Minus
Query 18193 ATTATCGGTGTCGCCGATCCTTTCCGTTCCGGCAAGGAGAACGGGGGACGCATCAGGGCG 18252
|||||||| || || || || ||||| ||| ||| ||||||| || |||||||| ||
Sbjct 2927651 ATTATCGGCGTGGCTGACCCGTTCCGCAGCGGTAAGCAGAACGGCGGCCGCATCAGTGCA 2927592
Query 18253 GTCAATGGCCGCCAGATTACGCTGGATCGAGAAATAGACTACGCGGCGAAAGACCGGCTG 18312
|| ||||| ||| | | |||||| || | || || || | || || ||||||
Sbjct 2927591 GTGAATGGTCGCAGCGTGAAGCTGGACCGCGCCATCGAATATTCAGCAGGGGATCGGCTG 2927532
Query 18313 GTGGTTAACCTGCCTGACGGAAAAGCCCAGACGCGCACAATCAGCGCGGTGAGCGCAGAT 18372
||||||||||| || ||||||| || ||||||||||| || | | || ||| ||
Sbjct 2927531 GTGGTTAACCTTCCAGACGGAACGGCTCAGACGCGCACTATAGCCACCGTCAGCAGTGAC 2927472
Query 18373 aaaaaaaCGGTGACGGTGGCCACCGCATTTAGTCAGGCACCTGTGGCGGGTGCTGTCTGG 18432
|| ||| ||||| || | ||| || | || || || ||||| || || |||
Sbjct 2927471 AAGCTAACCGTGACAGTCTCGACCAGTTTCCGCATGGACCCGGTCGCGGGCGCCGTATGG 2927412
Query 18433 GCGATAGACAGTGATAACCTCGCAATACAGTATTTCCGGGTCACTTCAATTGCAGCTAAC 18492
|| || ||||| |||||||| || || ||||| ||||| | || || || ||| |||||
Sbjct 2927411 GCCATTGACAGCGATAACCTTGCCATTCAGTACTTCCGTATTACCTCGATCGCATCTAAC 2927352
Query 18493 GACGACAGCACAGGCGGTTTCACTATTACGGCCGTTCAGCACGATCCAAACAAATACCGT 18552
|| ||| |||| |||| ||| | ||| || |||||||| || || || |||||
Sbjct 2927351 GATGACGGCAC-----GTTT-ACTGTAGCGGGTGTGCAGCACGACCCGAATAAGTACCGC 2927298
Query 18553 TACATCGATGACGGCGTTCGGGTCGAGTCGCCCCCGATCACCGTCACGCCGATAAGCGTC 18612
|||||||| || ||||| || | || || | |||||||||||||| || || |||||
Sbjct 2927297 TACATCGACGATGGCGTGCGTATTGAACCGGCACCGATCACCGTCACCCCAATCAGCGTA 2927238
Query 18613 CTGTCAGCGCCGAAGAATATC-GTGGTGACTGAGAGCGATCATGTTTCACAGGGGCTGAC 18671
||| |||| || ||| || ||| ||| | ||||| ||||||||| |
Sbjct 2927237 CTGAAGCCGCCCGCCAACATCAGTATTGA-GGAGCTCAGCTATGTTGAACAGGGGCTTTC 2927179
Query 18672 GGTAGCAAGCCTGGACGTGTCATGGGATAAGGTAGAGGGCGCAATCCGGTACGTTGCCCA 18731
|| || ||| || | || |||| | ||||| ||||| || | |||||||| ||
Sbjct 2927178 CGTTGCCAGCATGCAGGTTAAGTGGGGCAGAGTAGAAGGCGCGATAAGCTACGTTGCGCA 2927119
Query 18732 GTGGCGTAAGGACAACGGGGACTGGATAAACGT--TCCGGTTACCAGCGCGCAGGGTTTC 18789
|||||| ||||| || || |||||||| ||||| || | |||||||| ||||| |||
Sbjct 2927118 GTGGCGCAAGGATAAGGGCGACTGGATTAACGTCAGCCAG--ACCAGCGCACAGGGCTTC 2927061
Query 18790 TCGGTTCAG-GGCATTTATTCGGGCAGCTATGACGTGCGCGTCCGGGCGCTGAATGC-GC 18847
| |||| || ||||| ||||| || || || ||||| ||||| | ||||| ||
Sbjct 2927060 -AGCATCAGCGGGATTTACACGGGCGTTTACGATGTCCGCGTGCGGGCCGTCAATGCAGC 2927002
Query 18848 --AGGATACGTCGTCACCATGGGGGTACGGTGAAACAACTTATCTCTCCGGTAAAACGGG 18905
||| | ||||| |||||||| ||| || |||| || | || ||| ||
Sbjct 2927001 TGAGGTT---TCGTCCCCATGGGGTTACTCCGACTCAACGCCGCTAGCTGGCAAAGTCGG 2926945
Query 18906 AAAACCGGGTACTCCGCTCAACTTTCTGGCGACCGAAGATGTGGTCTGGCATATCGACCT 18965
|| ||||| || || ||| | | | || ||| | | || || ||| ||||||| ||
Sbjct 2926944 CAAGCCGGGAACGCCTGTCAGCCTGTTCGCCACCAATAACGTTGTGTGGAATATCGATCT 2926885
Query 18966 GACCTGGAAATTTCCGGATGGCTCTGGCGACACGGCCTATACAGAGATTCAGCGCGCCAC 19025
|||||| ||| || | |||||| |||||||| || || ||||| | ||| |||||
Sbjct 2926884 CACCTGGGCATTCCCCGCTGGCTCCGGCGACACTGCTTACACAGAACTGCAGGTGGCCAC 2926825
Query 19026 AACTGCCGAC 19035
|| || |||
Sbjct 2926824 CACCGCAGAC 2926815
Score = 109 bits (120), Expect = 2e-19
Identities = 166/233 (71%), Gaps = 5/233 (2%)
Strand=Plus/Minus
Query 22941 CCAACCACATATCGGACTCTTCAAACATTTCCTCCAGCAT-GCGGTTCAGTTTTTCCCGA 22999
||| ||||||||| | |||||||||||| ||||| | || || | ||| ||| || |
Sbjct 2920107 CCAGCCACATATCAGCCTCTTCAAACATCTCCTCAATCACAGCAGC-CAGCTTTGCCTTA 2920049
Query 23000 TCGCTTTTGCTGGCATCGCTGTTTAAGCCG---TTCGCCTGCATCGGCTTAACCTTCACT 23056
|||| ||| ||||||||| | || | || | || | ||||||||||||||||||
Sbjct 2920048 TCGCCTTTACTGGCATCGGTATTAATGCTGCTGTTAGTGACCATCGGCTTAACCTTCACC 2919989
Query 23057 TCTGCATCCGGAAAGATCCGGTGCACTCGCTTTGTTAACTCATTCAGAATTATTTCTCTG 23116
|| ||| ||||||| | ||||| |||||||| | ||| ||| || | || |||
Sbjct 2919988 TCAGCAGCCGGAAACACACGGTGTACTCGCTTCTCCAGTTCAGCCAGGATCAGCTCCCTG 2919929
Query 23117 GCACCTGTTAATCCTTCAACATTCCGTTTGTCGTACACCAACTCAACGAACAT 23169
|| | ||| | | ||||| || |||||||| | | |||||||||||
Sbjct 2919928 GCGTTCGGGAATTCGGCCACATTGCGCTTGTCGTAAATGAGTTCAACGAACAT 2919876
Score = 100 bits (110), Expect = 8e-17
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 23554 CGCACACGGGCGATGCGCGGGTAGATATGATTAATGCTGTTATTGTGTTGCTCGGCGCTG 23613
|| || ||||| ||||||||| | || | | |||| | ||| ||||| || |
Sbjct 1592555 CGAACGCGGGCAATGCGCGGGAAAATCCACTCGAAGCTGGCCTGGTGCTGCTCTGCCGTC 1592614
Query 23614 GCGGCACTACAGGCGTCTTCGGCAATCACCAGATTAAAGCCAAGTTCCCAGGCATTGCGG 23673
|| | || ||| ||||| ||||||||||| || ||||| || |||||||| || ||
Sbjct 1592615 GCCGTGCTGCAGATATCTTCCGCAATCACCAGGTTGAAGCCCAGCTCCCAGGCGTTACGC 1592674
Query 23674 GCGGTGGATTCAACACCGATATTGGTCGAGATCCCACATAACACAATTGTATCGATACCT 23733
||||| ||||||||||| || ||||| | || || | | ||||| || ||||| ||
Sbjct 1592675 GCGGTAGATTCAACACCAATGTTGGTGGCAATGCCGCCCAGAACAATCGTGTCGATGCCG 1592734
Query 23734 CGGCGGCG 23741
||||| ||
Sbjct 1592735 CGGCGACG 1592742
Score = 91.5 bits (100), Expect = 4e-14
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 22930 TTATTCTGAAACCAACCACATATCGGACTCTTCAAACATTTCCTCCAGCATGCGGTTCAG 22989
|| ||| || |||| |||| ||||| || |||||||| || || | ||||| |||
Sbjct 2402398 TTCTTCAGACACCATCCACTGATCGGCTTCCTCAAACATCTCTTCAATAATGCGTAACAG 2402339
Query 22990 TTTTTCCCGATCGCTTTTGCTGGCATCGCTGTTTAAGCCGTTCGCCTGCATCGGCTTAAC 23049
| | ||||||||| ||||| || || || | |||||| ||||||||||| || ||
Sbjct 2402338 CGTGGACTTATCGCTTTTACTGGCGTCACTTTTCACGCCGTTGGCCTGCATCGGTTTTAC 2402279
Query 23050 CTTCACTTCTGCATCCGGAAAGATCCGGTGCACTCGCTTT 23089
||| || ||||| ||||| | || ||||| ||||||
Sbjct 2402278 CTTGACCAGCGCATCGGGAAACACACGCTGCACGCGCTTT 2402239
>seq302
Length=239003
Score = 351 bits (388), Expect = 3e-92
Identities = 929/1401 (66%), Gaps = 37/1401 (3%)
Strand=Plus/Plus
Query 14313 ACCGCGCTGTGTCTTGAATATGACGATATGGTCAGGGCTAAGGTCAAAATCCATACCACG 14372
|| ||||| ||||| |||| || || ||||| | ||||||||| ||| | ||| |||
Sbjct 174092 ACGGCGCTTTGTCTGCAATACGATGACATGGTGAAGGCTAAGGTGAAAGTTCATTACAC- 174150
Query 14373 CTTTCGAAG-TATCTCGATGCCGCCAACTGGAAAAACGGTAATCCGGGTGCCAGCCCGGC 14431
|||| ||| || ||||| || ||||||||||| | || ||||| | || | |||
Sbjct 174151 CTTTAAAAGATACCTCGACGCAGCCAACTGGAAGCAGGGCAATCCAGACGCTAACCCCAA 174210
Query 14432 CGATGAGCGCGTACAGCTCTTTTACGTCAATGCCAAAACCGCAGAGACGCGTGTACAGGT 14491
|| ||||||| | ||| || |||||||| || ||||| | || || || || ||
Sbjct 174211 TGAAGAGCGCGAGCGGCTTTTCTACGTCAACGCGAAAACATCGGAAACCCGCACCCAAGT 174270
Query 14492 TGATTTCGAGCTGTGCTCTCCTTTCGATATTCAGAGCCTGCAGCTGCCGACACGGCAGAT 14551
||||||||| | || || || || | | || ||||| |||| || || || ||
Sbjct 174271 AGATTTCGAGTTATGTTCACCGTTTAACCTGCAATCTCTGCAATTGCCAACTCGCCAAAT 174330
Query 14552 TACGCCTGTCTGCACCTGGTGTATGCGGGGCTGGTACCGAAGCGGGACTGGATGCGATTA 14611
|| || || || |||||||||||||| |||||||| || || || || ||||||||
Sbjct 174331 GACCCCCGTTTGTACCTGGTGTATGCGTGGCTGGTATCGCTCAGGAACCGGCTGCGATTA 174390
Query 14612 CAACGGCACGAAATACTTTACCAAAGACGGTACACCGACCGATGACCCGTCGAAAGATGT 14671
|| | || ||||| ||||| || | | || ||||||||||| |||||||| ||
Sbjct 174391 TGCGGGGAGTAATTACTTCACCAAGGATGATGTGCCAACCGATGACCCATCGAAAGACGT 174450
Query 14672 ATGTGGCGGCCGCCGGCAGGATTGTCAGGATCGTCACGGCCCGG----ACGCGCCGCTGC 14727
||| || | | ||| | | | | | | | || | ||| | |
Sbjct 174451 GTGTCCTGGGCTTCTT---GATAG-CTGCAAATTGAGGTATGGGGAAAATAACCCGTTAC 174506
Query 14728 CGTTCGGCGGTTTTCCGGCTGCAAACCTGCAGGGGAAATAAA-ATGCGTGAAAAATTGCT 14786
| ||||| || || || | ||| ||| | |||||||||||| |||||||| ||||||||
Sbjct 174507 CCTTCGGTGGCTTCCCCGGTGCCAACTTACAGGGGAAATAATCATGCGTGAGAAATTGCT 174566
Query 14787 GGATGCTATCCGTCAGCACGTCGCTGCTGAATACCCCAAAGAAGCCTGCGGCCTGATTGT 14846
|| || || || |||||||| | |||||||| ||||||||||| ||| ||||| |
Sbjct 174567 CGAGGCAATACGCCAGCACGTTATCGAAGAATACCCGAAAGAAGCCTGTGGCGTGATTAT 174626
Query 14847 TCAGTCAGGCCAGCAACAAATCTTT-ATTCCCTGCCGCAACATTGCCGATAAGCCCGAGG 14905
||| ||| | ||| || ||| || || |||| || ||| || | ||
Sbjct 174627 CCAGA-AGGGTAACAAGCAAACTTACATGCCTTGCCATAATGATGCAGACGACCCGCTAA 174685
Query 14906 AGACATTCACGCTCTCCCCG---GAAGACCAGCTCGCTGCCCGCGCGCGCGGTGAGATCA 14962
| || || | | | || ||| | || | | | | ||| || | |
Sbjct 174686 ACACCTTTGTGATGCGTGAGTGTGATTACCGGTCAGCCGAACAAGAGGGCG---AGGTAA 174742
Query 14963 TCATGCTCATTCATTCCCATCCGGATGTGGTTCGGCTGGTGCCCTCGGAGCTGGACCGGA 15022
| ||| | || ||||| || || |||||| ||| | ||||| || ||||| | |
Sbjct 174743 TTATGTTTATCCATTCACACCCTGATGTGCCGGTGCTTATCCCCTCAGAAATGGACAGAA 174802
Query 15023 TCCAGTGCGACTGGTCGGGGATTGAGTGGGGGATCATGTCCTGGCCGGACGGGGATTTTT 15082
|| ||||||| | || ||| |||||||||| |||||||| ||||| || || ||||| |
Sbjct 174803 TCTAGTGCGATTACTCTGGGCTTGAGTGGGGCATCATGTCTTGGCCTGATGGTGATTTCT 174862
Query 15083 GTACGATTTCCCCGCGTGAAGACCGGGATTATGCCGGGCGGCAGTGGGTGCTGGGTTACG 15142
| || | || ||| | | ||||| ||||| | ||||||| |||||||| ||| |||
Sbjct 174863 GCACATTCTCACCGAGAGTCGACCGCGATTACGTTGGGCGGCCTTGGGTGCTTGGTCACG 174922
Query 15143 CCGACTGCTGGTCGCTTATCCGTGAATTTTATCTGCGCGAATACGGCATTGTTCTCGGCA 15202
| || |||||| |||| || || | | | ||| ||||| || |||| || | |
Sbjct 174923 CTGATTGCTGGGCGCTGATTATGGACTATCACAAGCGAGAATATGGGATTGAACTGCGTA 174982
Query 15203 ATTATTCAGTACCTTACGAATGGTGGGAGAGCGGCAAAGAGCGGCTCTACGATGACAACT 15262
| | || || ||||| ||||||||| | |||||||| | |||||| || ||||
Sbjct 174983 ACTGGTCGGTTCCTTATGAATGGTGGACAGGTGGCAAAGAAAATCGCTACGAGGATAACT 175042
Query 15263 GGGAGCGTGAGGGGTTCGTTGAGATT--GACGCCGGTGCTATGCAGCCCGGGGACATCAT 15320
|| | ||||| || | ||| | ||| ||| |||||||| ||||| ||
Sbjct 175043 GGCGGGCAGAGGGATTTATCGAGGTGCAGACCCCG--------CAGCCCGGCGACATGAT 175094
Query 15321 CATGATG--AGTGTGCAGGCATCGGTGACCAATCACGCCGCTGTATATCTGGGTGATAAC 15378
|||||| | | || ||| | || ||||| || ||||| | || || || ||||||
Sbjct 175095 AATGATGCAAATCGGC--GCACCAGTTACCAACCATGCCGCCATTTACCTTGGCGATAAC 175152
Query 15379 ATCATTCTCCATCATCTTTTCGGGCACCTTTCTTCGCGAACGCCTTATGGAAAATATTAT 15438
| ||||| ||||| ||||| | || || |||| || || || |||| |
Sbjct 175153 CTGATTCTTCATCACAACTTCGGCAATCTCTCAACGCGCGTTCCCTACGGTCAATACTTC 175212
Query 15439 CGCGACAGAACGGTCCGGGTGGTCAGGCATAAGGACAGAATGCATGGTTAAGACGCTTAT 15498
|| |||||||| || || | || | || ||||| | ||| |||| || || ||
Sbjct 175213 CGTGACAGAACCGTGCGCATCGTTCGACACAAGGATATTCCTGATGTTTAAAACACTCAT 175272
Query 15499 TCTCGAAGGTAAAATGGCaaaaaaaTTCGGTAA-ACGCGTTCAGTTTGATGTTGCCGACC 15557
|| |||| | ||| || |||||||| || | | || || | ||||||||
Sbjct 175273 CCTTAAAGGCCAGGCGGCTAAGCGCTTCGGTAAGACTCAT-CAATTCAACGTTGCCGATT 175331
Query 15558 TGCGCGAGATGCTCAGGGCCATGTGTTCACAGGTTCCCGGATTCAAAAAATATATGTCTG 15617
| ||||||| || | || |||||||||||||| || || ||||| ||| || ||
Sbjct 175332 TAAACGAGATGATCCGAGCGATGTGTTCACAGGTGAAAGGCTTTAAAAAGTATCTGGCTA 175391
Query 15618 AAGCTCAT-ATGAAGGGGATCCGTTTCGCCTTTTTTAACGGTGGCAACAATATCGGGCTG 15676
|||||| ||| | || || || || || || ||| ||| | |||| | || ||
Sbjct 175392 CTGCTCATCATG-ACGGTATTCGATTTGCTTTCTTTTCCGGCAAGAGCAATGTTGGACTA 175450
Query 15677 GAAGAGTTTGATATGACCCGC 15697
|||| || || |||| |||
Sbjct 175451 GAAGGTTTCGACCTGACTCGC 175471
>seq2181
Length=10605
Score = 150 bits (166), Expect = 5e-32
Identities = 204/279 (73%), Gaps = 4/279 (1%)
Strand=Plus/Plus
Query 14124 CTGCGTTTTCATGCGCACAATATTCAGGAAGAGGGGTGGGCAGCC-TTCGCCGCAGAAAA 14182
|| || || ||||| |||| ||| |||||||| ||| ||| | ||||| || |||||
Sbjct 1 CTTCGATTCCATGCCTACAACATTTCTGAAGAGGGCTGG-CAGTCATTCGCAGCCGAAAA 59
Query 14183 TCTGCCCGCCATTATCTGGCAGGGAAACCAGTACGATCCCCATCCCTACGAACTTAAGGG 14242
|| || | |||||||||||||| || ||||||| || ||||| || | || | ||
Sbjct 60 CCTTCCGTCGATTATCTGGCAGGGTAATGAGTACGACCCGCATCCTTATAAGCTAGAAGG 119
Query 14243 GATGGAGTTATCGAGTACAGGTTCCCAGCCAACGCCCACGCTGTCCGTCGGGAACGTCGG 14302
| || |||||||| ||| || ||||| || || | |||| ||||| |||||
Sbjct 120 TGTAGATGTATCGAGTGAAGGCTCACAGCCCACACCTATCTTGTCGGTCGGAAACGTGAT 179
Query 14303 AAACTATGTCACCGCGCTGTGTCTTGAATATGACGATATGGTCAGGGCTAAGGTCAAAAT 14362
||||| ||||| ||||| ||||| |||| || || ||||| | ||||||||| ||| |
Sbjct 180 GAACTACGTCACGGCGCTTTGTCTGCAATACGATGACATGGTGAAGGCTAAGGTGAAAGT 239
Query 14363 CCATACCACGCTTTCGAAG-TATCTCGATGCCGCCAACT 14400
||| ||| |||| ||| || ||||| || |||||||
Sbjct 240 TCATTACAC-CTTTAAAAGATACCTCGACGCAGCCAACT 277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147547425620672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |