Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_021561.1 Length=37324 Score E Sequences producing significant alignments: (Bits) Value seq1959 125 2e-24 >seq1959 Length=43063 Score = 125 bits (138), Expect = 2e-24 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 35540 AATCCTTTCCTTTGCTATCTCAAAGTAACCTTCATCCAACTCAATACCTATAAAATTTCG 35599 |||||| ||||||||||| ||||| || ||||| ||||| || || |||| || Sbjct 5199 AATCCTATCCTTTGCTATGCTGAAGTATGATTGATCCATTTCAATCCCGATGAAATATCT 5258 Query 35600 GTTTAGGTTTTTAGCTGCTACGCCAGTTGTGCCGCTTCCCATTGTGAAATCTAAAACGGT 35659 | | |||| | ||||| |||||| |||||||| ||||| ||||| ||| Sbjct 5259 ATCTGTGTTTAAACATGCTATGCCAGTAGTGCCGCTACCCATGCAATTATCTAGAACAAC 5318 Query 35660 TTCTCCTTCGTTAGTGTACGTTTTGATTAGGTACTCCATTAGTGCAACTGGTTTTTGTGT 35719 || |||||||| ||||| ||||||||||| ||||||||||| ||||| || ||||| Sbjct 5319 ATCGCCTTCGTTTGTGTATGTTTTGATTAGATACTCCATTAGCATTACTGGCTTCTGTGT 5378 Query 35720 TGGGTGCAA 35728 ||||||||| Sbjct 5379 TGGGTGCAA 5387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119306326155716