Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq122 86.0 4e-12 >seq122 Length=4874392 Score = 86.0 bits (94), Expect = 4e-12 Identities = 129/183 (70%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||| | ||| | ||| || ||||| || | ||||| || || || |||||||| ||||| Sbjct 1174891 CGGGATGTTAGCTTTAATCAGGCCGGTAATGACATCGACTGACGGACGCTGCGTTGCCAG 1174832 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95790 || || ||||| || ||||| ||||| ||||| || | ||| | || | || || Sbjct 1174831 CACCAGGTGAATACCCGCTGCACGCGCTTTCTGCGCCAGGCGAGCGATCAGCTCTTCCAC 1174772 Query 95791 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTA 95850 | |||| | || ||| || ||||| || | |||||||||| ||||||||||| Sbjct 1174771 CTTTTTCCCGA---CGGTCATGATCAGGTCGGCAAATTCGTCGACCATCACCACGATGTA 1174715 Query 95851 GGG 95853 || Sbjct 1174714 CGG 1174712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351720351026303