Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= NC_022768.1
Length=154701
Score E
Sequences producing significant alignments: (Bits) Value
seq122 91.5 1e-13
>seq122
Length=4874392
Score = 91.5 bits (100), Expect = 1e-13
Identities = 267/406 (66%), Gaps = 8/406 (2%)
Strand=Plus/Plus
Query 103240 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 103299
|| || || || || ||||||||||| || ||||| || ||||| ||||| || || ||
Sbjct 2805877 CTGCCGACGCCAATTATGTCCGGCGTGCGCACCCCGACGCGCCAGTTCAGCTCCTGCGTA 2805936
Query 103300 CTTATCAAAACCGGTGACACTTTGGACTCGATCAATGCTACAGCCAAAAGTATTGTTGAT 103359
|| || | ||| |||| | || || || || || || ||| ||||| |
Sbjct 2805937 CTGATTGAGTGCGGCGACAGCCTTGATTCCATTAACGCCACCTCCAGCGCGATTGTGAAG 2805996
Query 103360 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGC 103419
|| || || | || || || ||||| || | | ||| || |||| | || |||
Sbjct 2805997 TACGTTTCTCAGCGTGCCGGTATCGGCATTAACGCCGGTCGCATCCGTGCGCTGGGCAGC 2806056
Query 103420 CCTATCCGAAAAGGTGAAATGGTGCACACAGGCCTGGTTCCTTTC-ATAA--AATATCTG 103476
|| ||||| |||||| | ||||| ||| |||| ||| |||| | | | |
Sbjct 2806057 CCGATCCGCGGCGGTGAAGCATTCCACACCGGCTGCATTCCGTTCTATAAGCACTTCCAG 2806116
Query 103477 ACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGC-AACTTGCTA 103535
|| | || | ||||| |||||||| ||||| | || ||||| |||| | | || |
Sbjct 2806117 ACCGCGG---TGAAGTCCTGCTCTCAGGGCGGCGTGCGCGGCGGTGCAGCGACCCTGTTC 2806173
Query 103536 TATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCT 103595
|| ||| || |||||| || | || | |||| |||||||||||||| || |
Sbjct 2806174 TA-CCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGCGGCGT 2806232
Query 103596 TGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAAC 103641
||||| ||||| | || | ||| ||||| || | ||| | |||
Sbjct 2806233 TGAAGGCAACCGCGTGCGTCATATGGACTACGGCGTGCAGCTGAAC 2806278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494876454326280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |