Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq122 86.0 6e-12 >seq122 Length=4874392 Score = 86.0 bits (94), Expect = 6e-12 Identities = 135/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 68432 TGTACTGGGTAGTAAAGGAACCAACACCGTACACGATATTGCTGGATGCAAAGCCTTTAT 68491 |||||||| ||| | || || || ||| |||| | ||||||| ||||||||||| Sbjct 3983357 TGTACTGGTACGTATAAGACCCGACGCCGAACACCACATTGCTGCTGGCAAAGCCTTTGG 3983416 Query 68492 CTTTCAGACGTTCAAAGATGTCTTTTGCACGAGCAACAGTGATAGAGTCACCGTAGATCA 68551 | | |||||| | ||| | || ||||| | | || || ||||| |||||||||| Sbjct 3983417 CCTCCAGACGACTCAGGATCTGATTGGCACGCTCGAGGGTAATCGAGTCGCCGTAGATCA 3983476 Query 68552 GGCCAACATGACTATCCAGAACTTTGTAACCCTTGGAGTTAACTTCACCACCAAAGATTT 68611 | || || || ||||| || ||||| ||| ||| || || || || ||||| | Sbjct 3983477 GACCCACGTGCGGGTCCAGCACCTTGTAGCCCCTGGCATTGACCGTGCCGCCGAAGATCT 3983536 Query 68612 CCCACAGACACT 68623 ||||||| |||| Sbjct 3983537 CCCACAG-CACT 3983547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475249191015960