Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq122 140 9e-29 >seq122 Length=4874392 Score = 140 bits (154), Expect = 9e-29 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || || ||||| || || ||||| | || || | ||||||||| | ||| ||||||||| Sbjct 4802243 CCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGCTTGCCGAACAGCACAACGCGGTGC 4802184 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 ||||| || || || ||| ||||||||||||||||| ||||| ||| || || ||| Sbjct 4802183 CATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTGTCGCGCCAGGATTCGGAGGTAGCC 4802124 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 || |||||||| |||||| |||| || ||| |||||| ||||||||||| | ||| Sbjct 4802123 AGAGTGATGTTGGCAACGGCACCGCCATTCGGCATGTAGCGAACTTCCGGGTCCTGCCCC 4802064 Query 23719 AG 23720 || Sbjct 4802063 AG 4802062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139272841073156