Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq122 113 1e-20 >seq122 Length=4874392 Score = 113 bits (124), Expect = 1e-20 Identities = 140/190 (74%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 30203 TCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCT--GTTGCTGGC 30260 || |||| ||| ||||| | ||| |||||||||||||| || ||| | ||| | || Sbjct 4802216 TCAGCCAGCTTGCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTC--GC 4802159 Query 30261 CGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGC 30320 ||||||||||||| |||| ||| ||| || || |||||||||| || ||| || Sbjct 4802158 CGGTCTGCTTGTCGCGCCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGC 4802099 Query 30321 CGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGT 30380 | || ||||| |||||| ||||||||| || | || || || | ||| ||||||| Sbjct 4802098 CATTCGGCATGTAGCGAACTTCCGGGTCCTGCCCCAGATTTCCGACTAAAATTACTTTGT 4802039 Query 30381 TAACGCCTCT 30390 | |||||||| Sbjct 4802038 TTACGCCTCT 4802029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145627568417072