Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_023579.1 Length=75568 Score E Sequences producing significant alignments: (Bits) Value seq83 82.4 4e-11 >seq83 Length=912621 Score = 82.4 bits (90), Expect = 4e-11 Identities = 90/116 (78%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 41756 GGTTCGAATCCAGTATCTTCCTCCATCTTCAGGTCGTTAGCTCAGTTGGTTAGAGCACCG 41815 ||||||||||| ||| || ||| |||| |||||||||||||||||| ||||||| Sbjct 700877 GGTTCGAATCCGTCATCACCCACCA-CTTCGGGTCGTTAGCTCAGTTGG-TAGAGCAGTT 700934 Query 41816 GACTTTTAATCCGGTTGTCATTGGTTCGAGGCCAATACGACCTACCAAATTACAGT 41871 ||||||||||| | ||| ||||||| || |||||| |||||||| |||| Sbjct 700935 GACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAATT-CAGT 700989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241674351513047