Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq109 84.2 1e-11 >seq109 Length=705085 Score = 84.2 bits (92), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 7/183 (4%) Strand=Plus/Plus Query 94593 GTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 94652 |||| ||| || | ||||| | |||||||| || |||||||| |||||||| || | Sbjct 131221 GTTGGCCTTAATCAAACCCGTGATGACATCCACCGATGGCCGCTGTGTCGCCAGAACCAA 131280 Query 94653 ATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTT 94712 || || ||||||||||| || || || |||| ||| | || | ||||| | Sbjct 131281 GTGTATACCGGCCGCACGTGCTTTTTGAGCGAGACGGGCGATTAGCTCTTCAAC-----T 131335 Query 94713 CTTGTAGCCAC--CCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTAGGGG 94770 || || |||| ||||||| ||||| || | ||| || |||| || ||||| || || Sbjct 131336 TTTTTACCCACTGCCATCATTAGGTCGGCAAATTCGTCGACCATCACGACGATATAAGGC 131395 Query 94771 AGT 94773 ||| Sbjct 131396 AGT 131398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340095638411984