Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq122 165 2e-36 >seq122 Length=4874392 Score = 165 bits (182), Expect = 2e-36 Identities = 184/246 (75%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| |||||||| |||||||| || || ||| | || | || || || || || || Sbjct 4802020 ATGGCCAGCAGAGGCGTAAACAAAGTAATTTTAGTCGGAAATCTGGGGCAGGACCCGGAA 4802079 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || ||||| | || | ||||| || || || |||||||| | || || || || Sbjct 4802080 GTTCGCTACATGCCGAATGGCGGTGCCGTTGCCAACATCACTCTGGCTACCTCCGAATCC 4802139 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || ||||| ||||| | | ||||||||||| || |||||||| ||| || Sbjct 4802140 TGGCGCGACAAGCAGACCGGCGAAACCAAAGAGAAAACTGAATGGCACCGCGTTGTGCTG 4802199 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 || || |||||||||||||| || || |||||||| || ||||| ||||| |||||||| Sbjct 4802200 TTCGGCAAGCTGGCTGAAGTGGCCGGTGAATACCTGCGTAAAGGCTCTCAGGTTTATATC 4802259 Query 38434 GAAGGC 38439 |||||| Sbjct 4802260 GAAGGC 4802265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132889315871186