Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 3e-11 >seq21 Length=3499503 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 140506 CTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTTAAAAGATCAACGCG 140565 ||||||| || | |||||||| | |||||||||| || | |||| | || ||| | | Sbjct 778545 CTAATTTCTGCCTTGGAAAACATTTAGCAAGTGAAAATGAACGTTTACAGGACCAAAGAG 778486 Query 140566 GGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTA 140619 | || || || ||||| |||||||||||| | | || ||||||||| |||||| Sbjct 778485 GCTCCCCTGCTTATATATCTCCGGATGTTTTATGTGGGAAACCATATCTAGGTA 778432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704527240005360