Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq122 138 3e-28 >seq122 Length=4874392 Score = 138 bits (152), Expect = 3e-28 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 ||||| | ||| || ||||| ||||||||||||||||| ||| || || || ||| Sbjct 4802330 ACCACAACTTCGGTGGTGTACTTCTCAACGCCAGCCTGGTCAGTCCATTTACGGGTCTGC 4802271 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 || |||||||| || | |||| |||||| |||||||| | | ||| | ||| ||| Sbjct 4802270 AGTGCGCCTTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCC 4802211 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 ||||| ||||| | || |||||||||||||| ||||| ||||| | || || |||||| Sbjct 4802210 AGCTTGCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGC 4802151 Query 410 TTATCCTTCCAGGTTTCAGACGTGGC 435 || || ||||| ||| || || || Sbjct 4802150 TTGTCGCGCCAGGATTCGGAGGTAGC 4802125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135391529759878