Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq122 114 3e-21 >seq122 Length=4874392 Score = 114 bits (126), Expect = 3e-21 Identities = 251/374 (67%), Gaps = 4/374 (1%) Strand=Plus/Plus Query 22124 CACACTGTGGTCGCCGGATACCTGCCCGGTGCACCTGCTGCCTTATCTCGCCTGGGCGTT 22183 ||| |||||| ||| | || |||||| ||| ||||| || |||||||||||||| | Sbjct 197885 CACCCTGTGGAACCCGCAGACTTGCCCGCTGCCGCTGCTCCCCTATCTCGCCTGGGCCTG 197944 Query 22184 TTCCGTTGACCGCTGGGATCGCAACTGGCCGGAAGAGACAAAGCGACAGGT--TATTCGT 22241 || || || |||||||||| | |||||||||||||| | ||| ||| | || Sbjct 197945 GTCGGTGGATCGCTGGGATCAGGAGTGGCCGGAAGAGACCAGGCGTGCGGTGGTCGCCGC 198004 Query 22242 GATGCATGGCTGATACACCGACACAAAGGGACCATCAGCGCACTGCGCCGGGCCATTGAG 22301 ||| | | || ||||| | ||| || |||||| || | ||||||| | ||| Sbjct 198005 CTCGCA--GTTTATCCACCGCCGCAAGGGCACCATCTCGGCGATCCGCCGGGTGGTGGAG 198062 Query 22302 CCGCTGGGATACCTCATTCGCGTGTCTGAGTGGTGGGAGTTCGGCGGAGAACCGGGAACA 22361 |||||||| || | ||| ||| |||||||||| | | ||| | || || || Sbjct 198063 CCGCTGGGGTATGTGATTAACGTCCATGAGTGGTGGCAAACCAGCGAACCGCCCGGCACC 198122 Query 22362 TTTACCGTTGAAGTCGGCACGCTGGACAGTGGCGTGACGGAGGAAATGTATCTGGAAATG 22421 || | |||| ||||| |||||| ||| | || | |||| | |||||| Sbjct 198123 TTCCGCCTTGATATCGGCGTGCTGGAATCAGGCATTGATGAAGCGATGTTTAACGAAATG 198182 Query 22422 GAGCGGTTGATTGCTGATGCCCGCCCGGTCAGCCGCCACATGACAGGGCTGAATATCATT 22481 |||||| |||| | ||||| || ||||| ||||| | || || |||| || | Sbjct 198183 GAGCGGCTGATCGGCGATGCAAAACCTGTCAGTCGCCATCTTACCGGCCTGACGATTACC 198242 Query 22482 CAGGAAATTCCGGG 22495 ||||| || | ||| Sbjct 198243 CAGGATATCCAGGG 198256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114474685526656