Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq122 86.0 7e-12 >seq122 Length=4874392 Score = 86.0 bits (94), Expect = 7e-12 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 ||||||| ||| | |||| | ||||||||| || ||||| || | || ||| Sbjct 3442274 TGGGCCATCATATGCACCAGCAAAGCGTAGCTGGCGATATTGAACGGCAGGCCGAGGAAG 3442333 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 || || | || | ||| ||||| ||||| ||||||| ||||| || ||||| |||||| Sbjct 3442334 ATATCGCAGGAGCGCTGATACAGTTGGCAGGAGAGCTTGCCGTCCGCAACGTAGAACTGG 3442393 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 | | ||||||||| | ||||||||| | ||| || || |||||| || || Sbjct 3442394 AAGAACGCGTGGCACGGGGCCAGCGCCATCTCATCCAGTTCGCCGACGTTCCATGCAGAA 3442453 Query 147178 ACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGG 147237 || | | || | || |||| || || | || ||||| ||| ||||||||| Sbjct 3442454 ACGATGATGCGGCGCGAGTCCGGGTCGCTTTTCAGCTGTTCGACCACCTTGCTCAGCTGG 3442513 Query 147238 TC 147239 || Sbjct 3442514 TC 3442515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583442320183200