Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq122 114 5e-21 >seq122 Length=4874392 Score = 114 bits (126), Expect = 5e-21 Identities = 158/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 59928 TCGAGTCACCCGAGATCCACCTGAGCGCAC-AGTTTCTCGACGTTGACGGCCCACGCAAG 59986 |||| ||||||||| ||||| || || |||| || ||| | | |||||||| ||| Sbjct 2947170 TCGATTCACCCGAGCCGCACCTC-GCTTACCAGTTCCTTGACCTGGCTGGCCCACGTAAG 2947112 Query 59987 CTCAACGACATCACCGTGCTGTACGACGACGGCCAGCACCAAGCGTGGTCCGGACAGCGC 60046 || || ||| || |||| |||||| | |||| ||||| || | |||||||||| Sbjct 2947111 CTTAAAGACCTCGCCGTACTGTACCAGGACGATAAGCACATCGCTTACACCGGACAGCGA 2947052 Query 60047 GGC-TACTGCCTCTACTACCACCGATCCGCTATCGACGCGGTCGGAGGCTTCGACCCGAT 60105 ||| | ||| | ||||||||||| || || || || ||| || |||||||||||| | Sbjct 2947051 GGCGTGATGCTT-TACTACCACCGCTCAGCGATTGAGAAGGTTGGCGGCTTCGACCCGGT 2946993 Query 60106 CTACAGCCCCGGACTCTACGAGCACTCCGACCTGGC 60141 ||| | | ||| | ||||| ||||| |||||||| Sbjct 2946992 TTACGGGCGCGGCATGTACGAACACTCTGACCTGGC 2946957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202528539753185