Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= NC_026611.1
Length=43129
Score E
Sequences producing significant alignments: (Bits) Value
seq302 102 2e-17
>seq302
Length=239003
Score = 102 bits (112), Expect = 2e-17
Identities = 249/368 (68%), Gaps = 7/368 (2%)
Strand=Plus/Plus
Query 38595 TACAACCCCTCAGTTACTTCATCAAGAAAGCCCA-GCAGTCCTTCAACGAGTACATCCGA 38653
|| ||||||||||||| ||| || |||||||| |||| | ||||| ||||||||
Sbjct 152714 TAAAACCCCTCAGTTATTTCCACAGCAAAGCCCAAGCAG-CATTCAATACATACATCCGC 152772
Query 38654 GAGCGAGATAAAGACCAACCGTGCATCAGCTGCGGCCGCTACCACTCCGGGCAA-TGGCA 38712
| || ||| || || || || ||||| || || | || | ||| || | |
Sbjct 152773 ACAAGGGACGCAGAGCAGCCCTGTATTAGCTGTGGTCGTCATCA-TGAGGGTAAGTATGA 152831
Query 38713 CGGCGGGCATTATCGAACCACCGGCGCTAACCCTGAGCTTAGGTTCGATGAGTTTAACTG 38772
|| |||||||||||||| || || || | | | | | || || ||||||
Sbjct 152832 CGCAGGGCATTATCGAACGCGTGGAGCCTCGCCAGCGACTCGCTATGACGAAACTAACTG 152891
Query 38773 TCACAAGCAGTGCGCCCCCTGCAATAACCACCTATCCGGGAATATAGAAAACTACACGCC 38832
|| ||||| |||| ||||| ||| | ||| |||| || ||||| ||||||||||||||
Sbjct 152892 CCATAAGCAATGCGTTCCCTGTAATCAGCACTTATCAGGAAATATCGAAAACTACACGCC 152951
Query 38833 AAACCTGATCGCCAAAATCGGCCGGGCGCGATTCGATTCGCTCATGTCACACCATGAGCC 38892
||||| |||| ||||| || | | | ||||||| | | ||| | || |
Sbjct 152952 GAACCTTATCG-AAAAATAGGGCAGCAGGCATTCGATATGTTGATGGGGCCGCACCCGGT 153010
Query 38893 CAGGAAGTGGACGCGGGACGAGTTGGAAGAAATCGCCGCAACGTATCGG-AGAAAGACCA 38951
| || ||||||||||| ||| ||||| || | || || || || ||||| ||||
Sbjct 153011 AAAAAAATGGACGCGGGAAGAGCTGGAACAACTGGCGGCGCATTACAGGCAGAAA-ACCA 153069
Query 38952 AAGAGCTA 38959
|||||||
Sbjct 153070 GAGAGCTA 153077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137880944600546
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |