Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_027337.1 Length=88403 Score E Sequences producing significant alignments: (Bits) Value seq122 109 3e-19 >seq122 Length=4874392 Score = 109 bits (120), Expect = 3e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 87352 ATCTTTGGGGGAACTGTTAACTCTAAAGGGTTTAAGGTACTGGATGAGCACATCGGCCTT 87411 ||||| || || || || || | | || | ||||| ||||| |||| | || || Sbjct 3983534 ATCTTCGGCGGCACGGTCAATGCCAGGGGCTACAAGGTGCTGGACCCGCACGTGGGTCTG 3983475 Query 87412 ATCTATGGTGACTCTATCACACTGGAACGTGCAAACGAAATCCTGAAGCGTCTGTATGAA 87471 ||||| || ||||| || || || || ||||| || | ||||||| |||||| | | Sbjct 3983474 ATCTACGGCGACTCGATTACCCTCGAGCGTGCCAATCAGATCCTGAGTCGTCTGGAGGCC 3983415 Query 87472 ATGGGTTTTGCAAGCTCTAACGTAGTGTTTGGCGTAGGTTCTTACACTTACCAGTACATG 87531 | || ||||| ||| || || ||||| ||||| || ||||| || |||||||||| Sbjct 3983414 AAAGGCTTTGCCAGCAGCAATGTGGTGTTCGGCGTCGGGTCTTATACGTACCAGTACAAC 3983355 Query 87532 ACTCGTGACACCTTTGCATTTGCTGTCAAAGCAAC 87566 || ||||||||||||| || || | ||||| || Sbjct 3983354 ACGCGTGACACCTTTGGTTTCGCCATGAAAGCGAC 3983320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 282743216474452