Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq122 113 2e-20 >seq122 Length=4874392 Score = 113 bits (124), Expect = 2e-20 Identities = 161/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 21589 ATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTGG 21648 ||||||||||| ||||| | | | || | |||||| ||| | ||||| |||||| Sbjct 3442608 ATCTGGGACGAGTGGGCCGATGAAAAGGGTGACCTCGGGCCGGTTTATGGCAAACAGTGG 3442549 Query 21649 CGCAGCATCCAAGGCCCCG-ATGGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAGCT 21707 |||||| | ||| || |||| | |||||||||||| ||||| || | Sbjct 3442548 CGCAGC-TGGGGGGCAGCGGATGGGCGCCAGATCGACCAGCTGAGCAAGGTGGTCGAACA 3442490 Query 21708 GCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGCT 21767 |||| | |||||||||| |||||||||||||| ||| |||||||| | ||| || Sbjct 3442489 GCTGAAAAGCGACCCGGACTCGCGCCGCATCATCGTTTCTGCATGGAACGTCGGCGAACT 3442430 Query 21768 CGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 || ||||||| ||| | |||||||| ||| | |||||||||| Sbjct 3442429 GGATGAGATGGCGCTGGCCCCGTGCCACGCGTTCTTCCAGTTCT 3442386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236625136950593