Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq122 131 4e-26 >seq122 Length=4874392 Score = 131 bits (144), Expect = 4e-26 Identities = 180/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 41205 GATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACA 41264 || || ||| | || |||||||| | ||||| || ||||| || | | | || || Sbjct 4802071 GACCCGGAAGTTCGCTACATGCCGAATGGCGGTGCCGTTGCCAACATCACTCTGGCTACC 4802130 Query 41265 ACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGC 41324 | ||| |||| || || |||||||| | ||||| |||| |||||||||||| Sbjct 4802131 TCCGAATCCTGGCGCGACAAGCAGACCGGCGAAACCAAAGAGAAAACTGAATGGCACCGC 4802190 Query 41325 GTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGTAGCAAG 41384 ||||| | ||||| |||||||| ||| | || | ||||||||||| ||||| || Sbjct 4802191 GTTGTGCTGTTCGGCAAGCTGGCTGAAGTGGCCGGTGAATACCTGCGTAAAGGCTCTCAG 4802250 Query 41385 GTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTTGATCGC 41444 || | || |||||| |||| || ||||||||| ||||||||||||||||| Sbjct 4802251 GTTTATATCGAAGGCGCACTGCAGACCCGTAAATGGACTGACCAGGCTGGCGTTGAGAAG 4802310 Query 41445 TACACCACTGAA 41456 |||||||| ||| Sbjct 4802311 TACACCACCGAA 4802322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133199692785768