Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq64 226 9e-54 seq43 196 1e-44 seq3962 168 2e-36 seq275 159 1e-33 seq19 154 4e-32 seq11 138 3e-27 seq326 116 1e-20 seq4 107 6e-18 seq353 91.5 4e-13 seq45 89.7 2e-12 >seq64 Length=1295264 Score = 226 bits (250), Expect = 9e-54 Identities = 429/625 (69%), Gaps = 15/625 (2%) Strand=Plus/Minus Query 349526 TTTTTACCC-GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGC 349584 ||| ||||| || ||| ||||||| ||||| | || |||||||| | ||| ||||| Sbjct 191861 TTTCTACCCTGAGGAAGTTTCATCTATGGTCCTCACAAAGATGAAGGAGACTGCGGAAGC 191802 Query 349585 ATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGC 349644 ||| | || | || || || | || || | || ||||| || ||||| |||||| | Sbjct 191801 ATACCTTGGCAAGACTGTCACCAACGCCGTAGTCACCGTACCCGCATATTTCAATGATTC 191742 Query 349645 CCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGAT 349704 |||||| || || || |||||||| | |||||| | | || || || | || || Sbjct 191741 TCAGCGTCAGGCCACCAAGGATGCTGGTACCATTGCTGCACTGAACGTCCTCCGTATTAT 191682 Query 349705 TAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaa 349764 || || ||||||||||| || || || ||||| || || || | | | | | || | Sbjct 191681 CAACGAGCCCACTGCTGCTGCCATCGCTTATGGTCTCGACAAGAAGGGCAGCAAGGAGAG 191622 Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 ||| | || ||||| ||| | |||||||||||||||||||| || | || || |||| Sbjct 191621 CAATGTCCTCATTTTCGATCTTGGTGGTGGTACTTTTGATGTGTCCATCCTGACCATTGA 191562 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 ||| || || |||||||| || | || |||||||| || ||||||||||| |||||||| Sbjct 191561 AGATGGTATCTTTGAAGTCAAGTCCACCGCTGGTGACACCCATCTTGGTGGTGAAGATTT 191502 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATAT 349944 || || ||| | || || || || ||||| ||||| |||| || || || Sbjct 191501 CGACAACCGTATGGTCAACCACTTCGTCCTTGAATTCAAGCG-CAAG-TACAA--GA--- 191449 Query 349945 TGGAGATAATC-----CTAGA--GCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTA 349997 |||| | | | | ||| || | | || | || ||||| |||||| | || | Sbjct 191448 AGGAGCTCACCAGCAACAAGAGGGCTCTCAGGCGTTTGAGGACTGCCTGTGAAAGGGCGA 191389 Query 349998 AGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCA 350057 ||||| || | ||||| | ||||| | ||| | || || || || || || || | Sbjct 191388 AGCGTACCCTTTCATCCTCAACCCAGGCATCTGTGGAGATCGACTCCCTGTTCGAAGGAA 191329 Query 350058 AAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA 350117 || |||| | || || || |||||||| ||||| ||| | ||| || || || Sbjct 191328 TTGACTTCTACACCTCCATCACCCGTGCTCGTTTTGAGGAACTGTGTGCTGACCTCTTCC 191269 Query 350118 GAGCAACAATGGATCCTGTGGAAAA 350142 | || || ||||| |||||||| || Sbjct 191268 GTGCCACCATGGACCCTGTGGAGAA 191244 Score = 87.8 bits (96), Expect = 5e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 || |||||||||||||| | ||| || || ||||| || | || |||||||| || || Sbjct 191499 TCGAAATCTTCACCACCAAGATGGGTGTCACCAGCGGTGGACTTGACTTCAAAGATACCA 191558 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 |||||||| | | || || |||||||| ||||||||||| | ||| ||| Sbjct 191559 TCTTCAATGGTCAGGATGGACACATCAAAAGTACCACCACCAAGATCGAAA 191609 >seq43 Length=2082672 Score = 196 bits (216), Expect = 1e-44 Identities = 185/236 (78%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| ||||| || || | | |||||||| | ||| ||||| || || ||||| | Sbjct 901308 TTTACTGCCCACCGCGCAAACGCAAGACAAGATGTAAAGTGGACTCCTTCTGGATATTGT 901249 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| || || || ||||||||||| || || ||||||||||| | ||| ||||||| Sbjct 901248 AGTCAGACAAGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGAT 901189 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || |||||||| || || ||||| || ||||| || ||||| |||||||| | Sbjct 901188 CTGGGGGGATGCCTTCTTTGTCTTGGATTTTGGCCTTTACGTTCTCAATAGAATCAGAGG 901129 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||||||||| || |||| ||||| || || ||||| || ||||| ||||||||| Sbjct 901128 GTTCAACTTCCAGAGTAATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCATT 901073 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || |||||||| || || || || || |||||||| || || Sbjct 901076 CATTCCACCACGCAGACGGAGGACAAGATGGAGGGTGGATTCCTTCTGAATATTGTAGTC 901017 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || ||||||||||| || || || |||||||| | | ||||| || || Sbjct 901016 AGACAAAGTACGGCCATCTTCAAGCTGCTTACCGGCAAAGATCAATCTCTGCTGGTCTGG 900957 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || ||||||||||| || ||||| || || || || || ||||| || || || Sbjct 900956 GGGGATGCCCTCTTTATCCTGGATCTTAGCCTTGACGTTCTCGATGGAATCCGAGGGCTC 900897 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | ||||| || || || || || || || |||||||| Sbjct 900896 AACCTCCAGAGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 900846 >seq3962 Length=6517 Score = 168 bits (186), Expect = 2e-36 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| ||||| ||||| ||||| | ||||| ||||| ||||| || || |||||||||| Sbjct 6288 CTTTCTGAATGTTATAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 6229 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | ||||| ||||| || || ||||| || || || ||||| ||||| || || ||||| | Sbjct 6228 TCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTCACATTCT 6169 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 |||| || ||||| || ||||| || ||||| | ||||| ||||| || || || |||| Sbjct 6168 CAATTGAGTCAGAGGGCTCAACCTCTAGTGTGATGGTCTTGCCGGTAAGAGTCTTGACAA 6109 Query 140728 AAATCTGCATT 140738 ||||||||||| Sbjct 6108 AAATCTGCATT 6098 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||||||||| || || || ||||| || || || || || Sbjct 417 CATACCACCACGCAGACGGAGAACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTC 358 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || || || || ||||| || || || ||||| || || |||||||| || Sbjct 357 AGACAAGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGCTGATCTGG 298 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || ||||| ||||| || ||||| || || || || || ||||| || || || Sbjct 297 GGGGATGCCCTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGAATCCGAGGGCTC 238 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | ||||| || || || || || || ||||||||||| Sbjct 237 AACCTCCAGAGTGATGGTCTTGCCTGTAAGGGTCTTGACGAAAATCTGCAT 187 Score = 138 bits (152), Expect = 3e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||||||||| || ||||| ||||| || || || || || Sbjct 189 CATACCACCACGCAGACGGAGAACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTC 130 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || ||||| |||||||| || || || ||||| || | |||||||| || Sbjct 129 AGACAAGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGTCTCTGCTGATCTGG 70 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || ||||| || ||||| ||||| || || || || || Sbjct 69 GGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGAGTCTGAGGGCTC 10 Query 140687 AACTTCAAG 140695 ||| || || Sbjct 9 AACCTCCAG 1 >seq275 Length=398669 Score = 159 bits (176), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||||||||| || || || || | ||| |||||||| ||||| || ||||||||||| | Sbjct 170725 CTTTTTGAATGTTGTAGTCTGACAGTGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAAA 170666 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | ||||| ||||| || || || |||||||| || ||||||||||| ||||| || || | Sbjct 170665 TAAGACGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACGTTCT 170606 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 |||| || || || |||||||| || | || | || || || || || ||||| |||| Sbjct 170605 CAATAGAGTCTGAGGGTTCAACCTCTAAGGTGATAGTTTTCCCAGTGAGGGTTTTCACAA 170546 Query 140728 AAATCTGCATT 140738 | ||||||||| Sbjct 170545 AGATCTGCATT 170535 >seq19 Length=2947477 Score = 154 bits (170), Expect = 4e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| |||||||| || ||||| ||||| | ||||||||||| || || ||||| |||| Sbjct 340559 CTTTCTGAATATTGTAGTCAGACAATGTCCTGCCATCTTCAAGCTGCTTGCCAGCGAAGA 340618 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | ||||| ||||| || || || || ||||| || |||||||| ||||| || ||||| | Sbjct 340619 TGAGACGCTGCTGGTCTGGGGGGATACCTTCCTTGTCCTGAATCTTAGCCTTCACATTCT 340678 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 |||| ||||| || || || || ||||| || | ||||| || || || || || || | Sbjct 340679 CAATGGAATCTGAGGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 340738 Query 140728 AAATCTGCAT 140737 | |||||||| Sbjct 340739 AGATCTGCAT 340748 >seq11 Length=3525032 Score = 138 bits (152), Expect = 3e-27 Identities = 176/242 (73%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660 || ||| |||||||| | || || || ||||| || ||||||||||||||| ||||| Sbjct 608833 GTCACTCATGCTGTTGTCACCGTCCCTGCCTACTTCAATGATGCCCAGCGTCAAGCAACC 608892 Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCT 349720 || |||||||| | ||| | || | |||||| | | || || ||||| || |||||| Sbjct 608893 AAGGATGCTGGTACCATCTCTGGCCTGAATGTTATGCGTATTATCAATGAGCCTACTGCT 608952 Query 349721 GCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTT 349780 || || ||||| || ||| | || || | |||| ||||| ||| | ||| |||| Sbjct 608953 GCTGCTATTGCCTACGGGTTGGACAA---GCGTGAAGGCGAAAAGAATGTCCTTGTTTTC 609009 Query 349781 GATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAA 349840 ||| | || ||||||||||||||||| || || || || |||| | || | ||||| Sbjct 609010 GATCTTGGCGGTGGTACTTTTGATGTCTCCCTGCTGACCATTGATAATGGTGTCTTTGAG 609069 Query 349841 GT 349842 || Sbjct 609070 GT 609071 Score = 95.1 bits (104), Expect = 4e-14 Identities = 128/178 (72%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 349233 GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAA 349292 |||||| ||| | |||||| || || ||||| ||||| ||||| || |||||| | | Sbjct 608391 GTGTTGGTGTCTACAAAAATGGCCGCGTTGAAATTATTGCTAATGACCAGGGTAACCGTA 608450 Query 349293 CAACGCCATCATACGTTGCATTTACCG---AAACTGAGCGTATGATTGGTGATTCTGCAA 349349 || || || || || || ||||||| | ||||||| ||||||||||| |||| | Sbjct 608451 TTACTCCCTCTTATGTGGCCTTTACCGCTGAGGGTGAGCGTCTGATTGGTGATGCTGCCA 608510 Query 349350 AAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 | || || | | | ||||| | || || || |||||||| ||||| || ||||| Sbjct 608511 AGAACCAGCTTACCTCCAATCCTGAGAACACCGTCTTTGATGCAAAGCGTCTGATTGG 608568 Score = 93.3 bits (102), Expect = 1e-13 Identities = 232/352 (66%), Gaps = 8/352 (2%) Strand=Plus/Plus Query 350291 GTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA-AATAAGAGTTCTAAAAT 350349 ||||| |||||||| ||||| ||||| | || | ||||| || |||| | Sbjct 609848 GTTGCTTATGGTGCAGCTGTCCAGGCTGGTGTTCTCTCTGGTGAACAAGAC-------AC 609900 Query 350350 TGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGA 350409 ||||| | | | || | ||||| | || ||| | || || | |||||| ||| | Sbjct 609901 TGATGCTATTGTCCTTTTGGATGTGAACCCTCTTACCCTGGGTATTGAAACTGTTGGAGG 609960 Query 350410 AGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTT 350469 |||||||| || || || | || | | | ||||| || ||||| || | || Sbjct 609961 TGTAATGACAAAGCTCATCCCCCGCAACACTGTCATCCCTACCAAGAAGTCACAGATCTT 610020 Query 350470 TTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGC 350529 || ||| ||| || || |||| | || || |||||||| | ||||||||||||| | Sbjct 610021 CTCAACAGCTGCTGACAACCAGCACACTGTTACCATTCAAGTGTATGAAGGTGAACGTCC 610080 Query 350530 TCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCC 350589 || || || || | | ||||| ||||| || | || ||||| || || Sbjct 610081 CATGACCAAGGACAACCACCAGCTTGGCAAATTTGATCTTACTGGCATTCCTCCTGCTCC 610140 Query 350590 TAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATT 350641 | || ||||| || ||||| ||| ||||||| |||||| | || |||||| Sbjct 610141 ACGTGGTGTTCCCCAAATTGAGGTCACTTTCGAAATTGATGCCAACGGTATT 610192 >seq326 Length=250163 Score = 116 bits (128), Expect = 1e-20 Identities = 178/251 (71%), Gaps = 7/251 (3%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 ||||||||| ||| || |||| || || ||||| |||| ||||| || ||||| ||| Sbjct 174782 AAAATGAAGAAAACAGCGGAAGACTACTTGGGTGAGCCAGTGACTGAAGCCGTTATCACT 174841 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 ||||| || || || || ||||| || ||| ||||| |||||||||||| | || || Sbjct 174842 GTACCGGCATACTTCAACGATGCGCAACGTCAAGCAACTAAAGATGCTGGCCGTATCGCA 174901 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 |||||| | ||| | || || || ||||| || || ||||| | || ||||| | Sbjct 174902 GGGTTAGAAGTTAAGCGTATCATCAACGAACCAACAGCCGCAGCGCTGGCGTATGGCTTA 174961 Query 349742 GATAAAATGAGTGACCAAGaaa--aaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 || ||| |||| | | || | ||| ||| || |||||||||||||||| Sbjct 174962 GACAAA---GGTGA--AGGTAACCGTACTATCGCGGTTTACGACTTAGGTGGTGGTACTT 175016 Query 349800 TTGATGTATCA 349810 ||||| | ||| Sbjct 175017 TTGATATCTCA 175027 >seq4 Length=4567600 Score = 107 bits (118), Expect = 6e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 130836 CCATGTGCCGCATCAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTT 130895 ||||| || || |||||||| || || |||| ||| ||||| || || ||||||||| Sbjct 4299574 CCATGAGCAGCGTCAGCACATTCAAGAACAGCACTAAGCTGTGGGTAACCCACTCCAGTT 4299633 Query 130896 ACTTTTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCCT 130955 | || || ||||||| |||||| ||||| |||| ||||||||||||||| ||| Sbjct 4299634 TTCAGGCGAGTGGTGCAAACAGAACCTGGCCCAATTCCAACTTTAACAATATCAGCCCCT 4299693 Query 130956 GCTAAAATTAGTGCTTCGGTCATTTCTCTAGTAGCCACATTACCTGC 131002 | | ||||||| |||| ||| || | ||| | ||||| ||||| Sbjct 4299694 GAAAGAATTAGTTCTTCAACCATCTCCCCCGTAACAACATTGCCTGC 4299740 >seq353 Length=351880 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 378237 ACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATG 378296 ||| |||| | |||||| || ||||||||||| | ||| | ||||| ||||| || || Sbjct 337192 ACCTGTTTCAGCAGTTTTGACGGCAGTATCAATGAGACCCTCTCGACCTCCCATGGCGTG 337251 Query 378297 GAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGC 378356 |||| | ||||| | ||| || | ||| ||| | | ||| | || | ||| ||||| | Sbjct 337252 GAAGTAGAATTCTGAAGGTGTCAAACCAGCAAGATAGGAATTTTCTACAAAACCTCTAGA 337311 Query 378357 GCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGG 378416 | || || ||| | ||| | |||| |||| || | || || ||| |||| Sbjct 337312 TTCAGGACCATAATCGTCTTTGATGAAATGCGGTAGAGTTCTCTTACGGAAACCAAATGG 337371 Query 378417 AATTCGTTTTCCATCAACATTCTGTTGACC 378446 ||||||||| || || || || || ||||| Sbjct 337372 AATTCGTTTACCCTCTACGTTTTGCTGACC 337401 Score = 84.2 bits (92), Expect = 7e-11 Identities = 108/145 (74%), Gaps = 7/145 (5%) Strand=Plus/Plus Query 377439 TGATAATATTTCTTCAATGCGT-GGCACACCACGTGTAACATTCGATTTAGATGCAACAC 377497 ||||||| || ||||| || | ||||||||| | || || ||| || |||| |||| Sbjct 336276 TGATAAT-TTCCTTCA--GCCTAGGCACACCAAGAGTTACGTTC---TTTGATGACACAC 336329 Query 377498 CAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTG 377557 |||||||||||||||| || | || | |||||| | || ||||||| ||||| || | Sbjct 336330 CAGCAAAGTGGAAAGTGTTCAATGTCATTTGAGTGGCAGGTTCACCAAGAGACTGAGCAG 336389 Query 377558 CAATAACGCCAACCATTTCTCCAGG 377582 | | | || |||||||| ||||| Sbjct 336390 CCAAGGCACCTACCATTTCACCAGG 336414 >seq45 Length=1811775 Score = 89.7 bits (98), Expect = 2e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | ||| |||||| || || | || | ||||| |||||||||||||| || Sbjct 850507 TGGTCTACGTATTTAGCTGTGTTGTTGTACACACGAAGCATGGGAATAATACCATTTGAT 850566 Query 206509 GTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAATCCA 206568 || ||||| || || ||||| ||| || | | | |||| || || | | ||| Sbjct 850567 GTACCATTAGTGCCAGCAATATAACTTCCCTTGGCACGAATACAGTGAATGTTAACACCA 850626 Query 206569 ATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATCA 206628 || ||||| || | || ||||| |||||| ||||| | ||| | ||||| || ||| Sbjct 850627 ATACCTCCAGCTGACTTAGAAATCAAAGCACAGTCTTTCAGTGTGTCGTAAATGCCTTCA 850686 Query 206629 ACACTATCACTTTCCATAG 206647 | ||||||| || ||||| Sbjct 850687 ATACTATCATCTTTCATAG 850705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515132808884189