Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq212 82.4 4e-11 >seq212 Length=676889 Score = 82.4 bits (90), Expect = 4e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 65077 TCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACC 65136 |||||| | ||||| |||||||||||||| ||||| | | |||||||||||| ||| Sbjct 82513 TCCAGTGAGACGTGTACCAAACTGACCATTGGGCATAAGAAGATTAATATTGTTGCTACC 82572 Query 65137 AATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATA 65196 |||| |||| ||||| | || ||| | | | | | ||||||| || || || Sbjct 82573 AATATAATTTTGAGCTAAGTTGACAATCGTTCCCATGAGTGAGACTTCACCATGGTGGTA 82632 Query 65197 TCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTC 65244 |||||||||| | || | ||| || ||||| ||||||| ||| Sbjct 82633 AGCTGAATGTTCTGCTACTGAACCAGCTAACTGAGCCACTTTTACTTC 82680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235662010471950