Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq93 82.4 8e-11 >seq93 Length=974399 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/185 (71%), Gaps = 5/185 (3%) Strand=Plus/Minus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGA---GCATCATTTGCACAACGTCTC 59987 || || || ||||||||| ||||||| || || || | ||||| | || | Sbjct 914810 AAGGCCGATTGGGCCATGAAGTGGATTGCTCATGAGTCTGCCACGTTTGCTGAGCGAGTA 914751 Query 59988 ATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTG 60046 || || ||||| ||| ||||| || |||||||||||||| || ||| |||||||| Sbjct 914750 ATTGCCTTTGC-TGCTGTGGAGGGTATCTTCTTCTCTGGAAGCTTTGCTGCCATTTTCTG 914692 Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106 ||| || ||| | || || ||||| || || | ||| ||| ||| ||||||| || || Sbjct 914691 GCTTAAGAAGAGAGGGCTTATGCCAGGTCTTACCTTCAGCAATGAGTTGATTTCACGAGA 914632 Query 60107 CGAGG 60111 |||| Sbjct 914631 TGAGG 914627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548481857364720