Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq122 123 1e-23 >seq122 Length=4874392 Score = 123 bits (136), Expect = 1e-23 Identities = 230/336 (68%), Gaps = 4/336 (1%) Strand=Plus/Plus Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335 ||||| || |||||||| ||| | || || || | || ||||||||| |||||| Sbjct 4802029 AGAGGCGTAAACAAAGTAATTTTAGTCGGAAATCTGGGGCAGGACCCGGAAGTTCGCTAC 4802088 Query 7336 ATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGAC 7395 ||||| || ||| ||| || |||||||||| || || ||| ||| |||| ||| Sbjct 4802089 ATGCCGAATGGCGGTGCCGTTGCCAACATCACTCTGGCTACCTCCGAATCCTGGCGCGAC 4802148 Query 7396 AAGCAGACCGGCCAGCAAC--AGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTC 7453 |||||||||||| | ||| | || | || | |||||||| ||| | ||||| Sbjct 4802149 AAGCAGACCGGC--GAAACCAAAGAGAAAACTGAATGGCACCGCGTTGTGCTGTTCGGCA 4802206 Query 7454 GCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCA 7513 ||||| || | ||||| || |||||||| || || || ||||| || |||||||| Sbjct 4802207 AGCTGGCTGAAGTGGCCGGTGAATACCTGCGTAAAGGCTCTCAGGTTTATATCGAAGGCG 4802266 Query 7514 GCCTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAA 7573 |||| ||||| || ||| | |||| ||| || ||||||||||| || Sbjct 4802267 CACTGCAGACCCGTAAATGGACTGACCAGGCTGGCGTTGAGAAGTACACCACCGAAGTTG 4802326 Query 7574 TCGTCGACATGCACGGACAGATGCAGATGCTTGGCG 7609 | || || | ||| ||||||||||| |||| Sbjct 4802327 TGGTTAACGTTGGCGGCACCATGCAGATGCTGGGCG 4802362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194804710687286