Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_029023.1 Length=87712 Score E Sequences producing significant alignments: (Bits) Value seq122 86.0 4e-12 >seq122 Length=4874392 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 13524 GTTGCTTTGACAGCAAATGCAAAGGTGTCACGAGTCATATACTGGTAAGTGTAAGAGCCT 13583 || ||||| | || || ||||||||||||| || | |||||||| || ||||| || Sbjct 3983320 GTCGCTTTCATGGCGAAACCAAAGGTGTCACGCGTGTTGTACTGGTACGTATAAGACCCG 3983379 Query 13584 ACACCAAATACTACGTTAGAGCTTGCAAAACCCATTTCATACAAACGCTTCAGGATTTCG 13643 || || || || || || ||| ||||| || | | | || ||| ||||||| | Sbjct 3983380 ACGCCGAACACCACATTGCTGCTGGCAAAGCCTTTGGCCTCCAGACGACTCAGGATCTGA 3983439 Query 13644 TTTGCACGTTCCAACGTGATAGAGTCACCATAGATAAGTCCAATGTGCTCATCCAGTACC 13703 || ||||| || | || || ||||| || ||||| || || | |||| ||||| ||| Sbjct 3983440 TTGGCACGCTCGAGGGTAATCGAGTCGCCGTAGATCAGACCCACGTGCGGGTCCAGCACC 3983499 Query 13704 TTAAAACCTTTAGAGTTGATAGTCCCTCCAAAGAT 13738 || | || | | |||| || || || ||||| Sbjct 3983500 TTGTAGCCCCTGGCATTGACCGTGCCGCCGAAGAT 3983534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 280532185256039