Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq93 129 5e-25 >seq93 Length=974399 Score = 129 bits (142), Expect = 5e-25 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || || ||||| |||| | || |||||||| || || | |||||| || ||||||||| Sbjct 914956 ATGTATGTGTCGATTAACAAACTGTACATTTCTGAGTGAACATTTTCCATTGCAATCTGA 915015 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937 || || || ||||| | ||||||||||| |||||||| | || |||||||| |||||| Sbjct 915016 AAGCCATAGAAGCACCGTGCTTCTGTTACCTGAACTTCTTGACTGAATCTTTCCACTAAG 915075 Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAA 4993 ||||| || || || || ||| || ||||| || || | ||||| || ||||| Sbjct 915076 TTTTCATTGACAATCCCATCAGAAGCAGCAAAGAAGGCAAGGACATGGGAGATAAA 915131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427017003170579