Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq1959 87.8 5e-13 >seq1959 Length=43063 Score = 87.8 bits (96), Expect = 5e-13 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 6789 TCAATCATCGCTGATATGCAGAAGCGTCAACGAGATGTAGCAGAACTCGATGCCAGATAC 6848 |||| ||| | || ||||||| || || || ||||| || | |||||| || | ||| Sbjct 9625 TCAACAATCACCGACATGCAGACACGCCAGCGCGATGTTGCTGCACTCGACGCAAAGTAC 9684 Query 6849 ACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAAACTCTCCGCGCTGATGTTTCTGCT 6908 ||||||||| | ||||||||||| || | || ||| |||||||| || |||| || | Sbjct 9685 ACAAAGGAGTTAGCTGATGCTAAAGCCAGTAACGATTCTCTCCGCAATGCTGTTGATGAT 9744 Query 6909 GGGCGTAAGCG 6919 || || ||||| Sbjct 9745 GGCCGCAAGCG 9755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133657258752626