Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq122 181 3e-41 >seq122 Length=4874392 Score = 181 bits (200), Expect = 3e-41 Identities = 204/273 (75%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988 ||| |||||||| ||||||||| ||| ||||||||||||||||| |||| |||| Sbjct 4802322 TTCGGTGGTGTACTTCTCAACGCCAGCCTGGTCAGTCCATTTACGGGTCTGCAGTGCGCC 4802263 Query 26989 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCC 27048 ||| || | |||| |||||| |||||||||||||| || | ||| ||||||||||| Sbjct 4802262 TTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGCTTGCC 4802203 Query 27049 GAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTT 27108 ||| | ||||||||||||||||| || | |||||| | |||||| || ||| || Sbjct 4802202 GAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTGTCGCG 4802143 Query 27109 CCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCG 27168 ||| ||||| || || | ||| |||||||| || || || |||||||||||| Sbjct 4802142 CCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGCCATTCGGCATGTAGCG 4802083 Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 ||||| || || | || | ||| |||| ||| Sbjct 4802082 AACTTCCGGGTCCTGCCCCAGATTTCCGACTAA 4802050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134006032811280