Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_031124.1 Length=76012 Score E Sequences producing significant alignments: (Bits) Value seq122 102 4e-17 >seq122 Length=4874392 Score = 102 bits (112), Expect = 4e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 51458 GCTTGATCCGCACGTGGGTGTGATTTACGGCGACTCAATCACGATTGAGCGCGCCGAGCG 51517 ||| || |||||||||||| |||| ||||||||||| || || | ||||| ||| | | Sbjct 3983496 GCTGGACCCGCACGTGGGTCTGATCTACGGCGACTCGATTACCCTCGAGCGTGCCAATCA 3983437 Query 51518 CATTACCCGGCGTATGGAGCGGCTGGGTTACGCGTCGTCCAACGTGGTGTTTGGCGTGGG 51577 || | ||| ||||| || | || ||| |||||||| ||||| || Sbjct 3983436 GATCCTGAGTCGTCTGGAGGCCAAAGGCTTTGCCAGCAGCAATGTGGTGTTCGGCGTCGG 3983377 Query 51578 CAGCTATACGTACCAGTACAACACGCGCGACACGTTCGGGTCCGCGATGAAAGCGACGT 51636 ||||||||||||||||||||||| ||||| || || | ||| ||||||||||||| Sbjct 3983376 GTCTTATACGTACCAGTACAACACGCGTGACACCTTTGGTTTCGCCATGAAAGCGACGT 3983318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243095043062939